RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 RFX2P48378 723 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 SRSF2Q01130 221 aaKnown RBP8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DEFA6Q01524 100 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 PNLIPRP3Q17RR3 467 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 MPV17LQ2QL34 196 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 OR52W1Q6IF63 320 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 C11orf71Q6IPW1 123 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 GDPD3Q7L5L3 318 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 C5orf24Q7Z6I8 188 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DEFB108BQ8NET1 73 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 OR11L1Q8NGX0 322 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DIRC2Q96SL1 478 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 CMSS1Q9BQ75 279 aaKnown RBP8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DPCDQ9BVM2 203 aaPredicted RBP8.42□□□□□ -1.06
CRLF3-202ENST00000577725 EGLN1Q9GZT9 426 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 HRASLSQ9HDD0 168 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 CBLN4Q9NTU7 201 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 RCC2Q9P258 522 aaKnown RBP8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DNAJB11Q9UBS4 358 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 HSF4Q9ULV5 492 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 PPP1R3CQ9UQK1 317 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 WIPI2Q9Y4P8 454 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 DSCAMO60469 2012 aa8.42□□□□□ -1.06
CRLF3-202ENST00000577725 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 IGKV1D-8A0A087WSZ0 117 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 TRAV39A0A0B4J263 110 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 A0A1B0GW55 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 TMEM82A0PJX8 343 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 ANKRD20A5PA0PJZ0 165 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A10PA6NDY2 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A18PA6NE21 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A16PA6NEW6 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A20PA6NIJ5 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A8PA6NJQ4 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A7PA6NKC0 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A22PA8MWA6 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A12PA8MX19 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A5PA8MXJ8 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A23PA8MXZ1 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 SLC33A1O00400 549 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 SH2D1BO14796 132 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CD3DP04234 171 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CSN2P05814 226 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 ACAA1P09110 424 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A15PP0C7V4 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A13PP0C7W8 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A14PP0C7W9 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM90A24PP0C7X0 464 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DANCRP0C864 163 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 GSTT2BP0CG30 244 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L2P0CJ85 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L3P0CJ86 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L4P0CJ87 422 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L5P0CJ88 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L6P0CJ89 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L7P0CJ90 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 PSG2P11465 335 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 IRF2P14316 349 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 TNFRSF1AP19438 455 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 BTCP35070 178 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 RCVRNP35243 200 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 GABRA2P47869 451 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 COL10A1Q03692 680 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 TRIM16LQ309B1 348 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 SMIM21Q3B7S5 101 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 PAN3Q58A45 887 aaKnown RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 AGAP6Q5VW22 663 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4L9Q6RFH8 374 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 FIP1L1Q6UN15 594 aaKnown RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 C12orf54Q6X4T0 127 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 Q6ZPA2 131 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 NRARPQ7Z6K4 114 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 LINC00596Q86U02 117 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CD177Q8N6Q3 437 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 MAPK1IP1LQ8NDC0 245 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 OR4D10Q8NGI6 311 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 PLPPR1Q8TBJ4 325 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 SETD6Q8TBK2 473 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 Q8TCH9 128 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CHPT1Q8WUD6 406 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 TRAF4Q9BUZ4 470 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 ST6GALNAC5Q9BVH7 336 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CACNG6Q9BXT2 260 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CHST6Q9GZX3 395 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 MMP28Q9H239 520 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 PPA2Q9H2U2 334 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 CHMP1AQ9HD42 196 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 ZNF701Q9NV72 531 aaPredicted RBP8.41□□□□□ -1.06
CRLF3-202ENST00000577725 ETAA1Q9NY74 926 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 NLKQ9UBE8 527 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 DUX4Q9UBX2 424 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
CRLF3-202ENST00000577725 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.06
CRLF3-202ENST00000577725 A6NJY4 79 aa8.4□□□□□ -1.06
CRLF3-202ENST00000577725 SERPINE3A8MV23 424 aa8.4□□□□□ -1.06
CRLF3-202ENST00000577725 MCRIP1C9JLW8 97 aa8.4□□□□□ -1.06
CRLF3-202ENST00000577725 KNG1P01042 644 aa8.4□□□□□ -1.06
CRLF3-202ENST00000577725 LHBP01229 141 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms