RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 FOXE3Q13461 319 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 GPR50Q13585 617 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 TMEM244Q5VVB8 128 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 LCNL1Q6ZST4 164 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 PRSS35Q8N3Z0 413 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 RFT1Q96AA3 541 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 ADAT3Q96EY9 351 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 NRBF2Q96F24 287 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 NSL1Q96IY1 281 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 PPIL3Q9H2H8 161 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 NEK6Q9HC98 313 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 PALMDQ9NP74 551 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 WARS2Q9UGM6 360 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 SMAD5-AS1Q9Y6J3 95 aa9.15□□□□□ -0.94
CTDNEP1-212ENST00000576613 MEIKINA0A087WXM9 373 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGKV1-12A0A0C4DH73 117 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 NCBP2LA6PVI3 153 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 SLC33A1O00400 549 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 DEGS1O15121 323 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 LY86O95711 162 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGKV1D-12P01611 117 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 ELANEP08246 267 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 CALB2P22676 271 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 ATP6V1E1P36543 226 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 EFNB1P98172 346 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZNF260Q3ZCT1 412 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 UTF1Q5T230 341 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 Q6P435 159 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 FAHD1Q6P587 224 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 TGIF2LXQ8IUE1 241 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 SAXO1Q8IYX7 474 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR10H4Q8NGA5 316 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR51T1Q8NGJ9 327 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR5D18Q8NGL1 313 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 LEAP2Q969E1 77 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 FGGYQ96C11 551 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 IL4I1Q96RQ9 567 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 ABCG5Q9H222 651 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 LIN7CQ9NUP9 197 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 CALYQ9NYX4 217 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 IDI2-AS1Q9NZ38 188 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 SCOCQ9UIL1 159 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 GNG8Q9UK08 70 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 PSG11Q9UQ72 335 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZAR1LA6NP61 321 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 CCRL2O00421 344 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 HSPB6O14558 160 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 HSD17B6O14756 317 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 MPZL2O60487 215 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 FKBP6O75344 327 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 IL1AP01583 271 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 IGHV3-7P01780 117 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 LYL1P12980 280 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 KIR3DL2P43630 455 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 GPR12P47775 334 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 GNG10P50151 68 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 DAPP51397 102 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 INSL3P51460 131 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 DIAPH2-AS1Q14236 149 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 C12orf73Q69YU5 71 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 SLC16A12Q6ZSM3 486 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 SPATA24Q86W54 205 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 RDH10Q8IZV5 341 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 C4orf3Q8WVX3 66 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 OSBPL10Q9BXB5 764 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 BARHL1Q9BZE3 327 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 NCOR1P1Q9H4R4 102 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 ENOPH1Q9UHY7 261 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 DYNC2H1Q8NCM8 4307 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-212ENST00000576613 LINC01548A6NM66 108 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 H0YJX3 145 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 APOL3O95236 402 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 MT-ND2P03891 347 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 GAPDHP04406 335 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 ISG15P05161 165 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 CGB3P0DN86 165 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 CGB7P0DN87 165 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 DBTP11182 482 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 VDAC1P21796 283 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 HTR1FP30939 366 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 ZNF816Q0VGE8 651 aaPredicted RBP9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 FHL3Q13643 280 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 EBI3Q14213 229 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 FLOT2Q14254 428 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 CDK5R1Q15078 307 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 LTC4SQ16873 150 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 FAM27D1Q5T7N8 215 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 MOB3BQ86TA1 216 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 IZUMO1Q8IYV9 350 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR10A7Q8NGE5 316 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR13A1Q8NGR1 328 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 OR2T10Q8NGZ9 312 aa9.12□□□□□ -0.95
CTDNEP1-212ENST00000576613 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms