RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 AADACP22760 399 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 UCP1P25874 307 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 DUSP1P28562 367 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 GNG4P50150 75 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 PPP1CBP62140 327 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 IHHQ14623 411 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 GNMTQ14749 295 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 ANKRD55Q3KP44 614 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 PLXDC2Q6UX71 529 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 SYT13Q7L8C5 426 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 TRAPPC6BQ86SZ2 158 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 OR2AE1Q8NHA4 323 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 DOK4Q8TEW6 326 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 WBP2Q969T9 261 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 TMEM230Q96A57 120 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 LRRC61Q9BV99 259 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 GTSF1LQ9H1H1 148 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 TMEM30AQ9NV96 361 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 RFNGQ9Y644 331 aa6.94□□□□□ -1.3
TOM1L1-220ENST00000575333 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 NSG1A0A0A6YYJ2 146 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 SMIM28A0A1B0GU29 152 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 TMEM250H0YL14 139 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 KBTBD11O94819 623 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 ATP6V0CP27449 155 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 SFTPDP35247 375 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 HRH1P35367 487 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 CDKN2AP42771 156 aaKnown RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 FXYD6P3P58550 94 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 ARF3P61204 181 aaPredicted RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 HSPB3Q12988 150 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 MRPL58Q14197 206 aaKnown RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 FAM110CQ1W6H9 321 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 HLA-BQ31612 363 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 DCAF4L1Q3SXM0 396 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 TMEM177Q53S58 311 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 WDR25Q64LD2 544 aaPredicted RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 SLC18B1Q6NT16 456 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 INO80CQ6PI98 192 aaPredicted RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 C20orf204Q6ZNR8 217 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 FA2HQ7L5A8 372 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 MRGPRGQ86SM5 289 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 TUSC5Q8IXB3 177 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 EMG1Q92979 244 aaKnown RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 WFDC6Q9BQY6 131 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 RTBDNQ9BSG5 229 aaPredicted RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 RSPO3Q9BXY4 272 aaPredicted RBP6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 SH3BGRL3Q9H299 93 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 PRSS16Q9NQE7 514 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 AHSPQ9NZD4 102 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 ANAPC10Q9UM13 185 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 HTTP42858 3142 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 SCN1AP35498 2009 aa6.93□□□□□ -1.3
TOM1L1-220ENST00000575333 TRAV38-1A0A0B4J264 116 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 FITM1A5D6W6 292 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 GAGE12HA6NDE8 117 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 PGPEP1LA6NFU8 196 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 IGLON5A6NGN9 336 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 METTL12A8MUP2 240 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 K7EP34 96 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 HBZP02008 142 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 DBHP09172 617 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 PIRTP0C851 137 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 MMP9P14780 707 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 IL9P15248 144 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 CRISP2P16562 243 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 SLC6A6P31641 620 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 SGSHP51688 502 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 CCL23P55773 120 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 CLDN6P56747 220 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 KRTDAPP60985 99 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 RHOBP62745 196 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 SEC11AP67812 179 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 HIST1H1AQ02539 215 aaPredicted RBP6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 GAGE5Q13069 117 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 GAGE6Q13070 117 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 SRSF6Q13247 344 aaKnown RBP6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 BVES-AS1Q5T3Y7 98 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 STUMQ69YW2 141 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 NXPE1Q8N323 547 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 OR6N2Q8NGY6 317 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 NINJ1Q92982 152 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 AP1S3Q96PC3 154 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 C5orf66Q9H5L9 145 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 EHFQ9NZC4 300 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 KCNIP1Q9NZI2 227 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 CKLFQ9UBR5 152 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 HHLA2Q9UM44 414 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 VDAC3Q9Y277 283 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 B3GALT1Q9Y5Z6 326 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 TRBV9A0A0B4J1U6 114 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 A0A1B0GV50 99 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 DPRXA6NFQ7 191 aa6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 CPSF4LA6NMK7 179 aaKnown RBP6.92□□□□□ -1.3
TOM1L1-220ENST00000575333 UPK3BL1B0FP48 263 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms