RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 MRPL30Q8TCC3 161 aaKnown RBP24.04■■□□□ 1.44
CTDNEP1-210ENST00000574322 NEK7Q8TDX7 302 aa24.04■■□□□ 1.44
CTDNEP1-210ENST00000574322 TMPRSS13Q9BYE2 586 aa24.04■■□□□ 1.44
CTDNEP1-210ENST00000574322 DUSP13Q9UII6 198 aa24.04■■□□□ 1.44
CTDNEP1-210ENST00000574322 ATP23Q9Y6H3 246 aa24.04■■□□□ 1.44
CTDNEP1-210ENST00000574322 HS3ST1O14792 307 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 SH2D1BO14796 132 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 OR2H2O95918 312 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 THBDP07204 575 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 GLRA1P23415 457 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 VAMP1P23763 118 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 UCP3P55916 312 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 BAMBIQ13145 260 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 DCAF12L2Q5VW00 463 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 RDH5Q92781 318 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 TMEM246Q9BRR3 403 aa24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 C14orf166Q9Y224 244 aaKnown RBP24.03■■□□□ 1.44
CTDNEP1-210ENST00000574322 SLC33A1O00400 549 aaPredicted RBP24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 SNAPC5O75971 98 aa24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 SIX6O95475 246 aa24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 ZNF44P15621 663 aa24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 RPS2P15880 293 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 LMO1P25800 156 aa24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 SUPT4H1P63272 117 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-210ENST00000574322 TRDCB7Z8K6 153 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 C3orf80F5H4A9 247 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 H7C1Q1 480 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 PGAM2P15259 253 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 CFHR2P36980 270 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 GLP1RP43220 463 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 PRAMEF6Q5VXH4 476 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 C11orf88Q6PI97 169 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 MOB3AQ96BX8 217 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 GON7Q9BXV9 100 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 SLC23A1Q9UHI7 598 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 CTXN2P0C2S0 81 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 FCGR2CP31995 323 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 CLEC18BQ6UXF7 455 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 ZNF826PQ6ZT77 177 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 OR10Z1Q8NGY1 313 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 WDR89Q96FK6 387 aaPredicted RBP24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 CLEC4MQ9H2X3 399 aaPredicted RBP24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 SLA2Q9H6Q3 261 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 TMEM165Q9HC07 324 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 HSPB11Q9Y547 144 aa24.01■■□□□ 1.43
CTDNEP1-210ENST00000574322 ZSCAN5BA6NJL1 495 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 CCL21O00585 134 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 HSPB6O14558 160 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 PI3P19957 117 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 LIN54Q6MZP7 749 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 ACP7Q6ZNF0 438 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 OR2Z1Q8NG97 314 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 FXYD6Q9H0Q3 95 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 CADP27708 2225 aa24■■□□□ 1.43
CTDNEP1-210ENST00000574322 IGHV3-64DA0A0J9YX35 117 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 A6NLC8 198 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 CD8AP01732 235 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 SELENOVP59797 346 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 PAN3Q58A45 887 aaKnown RBP23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 RASL12Q9NYN1 266 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 GLS2Q9UI32 602 aa23.99■■□□□ 1.43
CTDNEP1-210ENST00000574322 PLSCR5A0PG75 271 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 DPRXA6NFQ7 191 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 HAND1O96004 215 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 ZNF728P0DKX0 622 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 SEC61A1P61619 476 aaKnown RBP23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 ZNF497Q6ZNH5 498 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 C20orf204Q6ZNR8 217 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 MOB1BQ7L9L4 216 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 ASCC1Q8N9N2 400 aaKnown RBP23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 CASTOR1Q8WTX7 329 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 MRPL24Q96A35 216 aaKnown RBP23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 PIK3IP1Q96FE7 263 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 KNG1P01042 644 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 ASCL1P50553 236 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 FBXL19-AS1Q494R0 122 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 IGSF11Q5DX21 431 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 WFDC8Q8IUA0 241 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 SYT3Q9BQG1 590 aa23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 MRPL37Q9BZE1 423 aaKnown RBP23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 SEBOXQ9HB31 216 aaPredicted RBP23.98■■□□□ 1.43
CTDNEP1-210ENST00000574322 SIRPB1O00241 398 aa23.97■■□□□ 1.43
CTDNEP1-210ENST00000574322 ELMOD3Q96FG2 381 aa23.97■■□□□ 1.43
CTDNEP1-210ENST00000574322 IFNL4K9M1U5 179 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 SCTP09683 121 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 LGALSLQ3ZCW2 172 aaPredicted RBP23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 VHLLQ6RSH7 139 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 OR4A4PQ8NGN8 299 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 COQ8AQ8NI60 647 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 UFSP2Q9NUQ7 469 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 C1orf123Q9NWV4 160 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 TAAR3PQ9P1P4 343 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 RELNP78509 3460 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 CRYM-AS1A6NIL9 109 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 HMSDA8MTL9 139 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 WNT9BO14905 357 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 TK1P04183 234 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 GATA4P43694 442 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 HERPUD1Q15011 391 aa23.96■■□□□ 1.43
CTDNEP1-210ENST00000574322 SMIM21Q3B7S5 101 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms