RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 OR6C3Q9NZP0 311 aa13.69□□□□□ -0.22
CCDC40-211ENST00000574099 SIRT4Q9Y6E7 314 aaPredicted RBP13.69□□□□□ -0.22
CCDC40-211ENST00000574099 STARD9Q9P2P6 4700 aa13.69□□□□□ -0.22
CCDC40-211ENST00000574099 A0A1W2PPE3 182 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 CCRL2O00421 344 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 ELANEP08246 267 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 ATF1P18846 271 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 CRISP1P54107 249 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 Q6P435 159 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 LHFPL2Q6ZUX7 228 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 MOB3BQ86TA1 216 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 ADGRG5Q8IZF4 528 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 PRSS35Q8N3Z0 413 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 OR13A1Q8NGR1 328 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 PP6455Q8WZ26 134 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 CITED4Q96RK1 184 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 GON7Q9BXV9 100 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 ABCG5Q9H222 651 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 IDI2-AS1Q9NZ38 188 aa13.68□□□□□ -0.22
CCDC40-211ENST00000574099 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
CCDC40-211ENST00000574099 SORL1Q92673 2214 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 HSD17B6O14756 317 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 APOL3O95236 402 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 HCKP08631 526 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 ANXA8P13928 327 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 MNAT1P51948 309 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 TGIF2LXQ8IUE1 241 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 TCEANCQ8N8B7 351 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 RNF152Q8N8N0 203 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 Q8N9W7 124 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 OR10X1Q8NGY0 326 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 HAVCR2Q8TDQ0 301 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 RNFT2Q96EX2 444 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 EAF1Q96JC9 268 aaPredicted RBP13.67□□□□□ -0.22
CCDC40-211ENST00000574099 OPALINQ96PE5 141 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 ISYNA1Q9NPH2 558 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 LIN7CQ9NUP9 197 aaKnown RBP13.67□□□□□ -0.22
CCDC40-211ENST00000574099 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 KIF25Q9UIL4 384 aa13.67□□□□□ -0.22
CCDC40-211ENST00000574099 MEIKINA0A087WXM9 373 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 DEGS1O15121 323 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 RRP9O43818 475 aaKnown RBP13.66□□□□□ -0.22
CCDC40-211ENST00000574099 KDM4BO94953 1096 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 OCM2P0CE71 109 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 OCMP0CE72 109 aaPredicted RBP13.66□□□□□ -0.22
CCDC40-211ENST00000574099 PRKACBP22694 351 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 KIR3DL2P43630 455 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 PTGES3Q15185 160 aaKnown RBP13.66□□□□□ -0.22
CCDC40-211ENST00000574099 HSP90B2PQ58FF3 399 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 FAM27D1Q5T7N8 215 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 ASPHD1Q5U4P2 390 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 CHST4Q8NCG5 386 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 CCDC54Q8NEL0 328 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 RFESDQ8TAC1 157 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 RBMXL1Q96E39 390 aaKnown RBP13.66□□□□□ -0.22
CCDC40-211ENST00000574099 OR5B12Q96R08 314 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 HSPB9Q9BQS6 159 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 CSMD3Q7Z407 3707 aa13.66□□□□□ -0.22
CCDC40-211ENST00000574099 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 A0A1W2PQL4 384 aaPredicted RBP13.65□□□□□ -0.22
CCDC40-211ENST00000574099 METTL15A6NJ78 407 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 B2RBV5 119 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 IL1AP01583 271 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 UBCP0CG48 685 aaKnown RBP13.65□□□□□ -0.22
CCDC40-211ENST00000574099 CGB3P0DN86 165 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 CGB7P0DN87 165 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 ZNF20P17024 532 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 VDAC1P21796 283 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 SSTR5P35346 364 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 INSL3P51460 131 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 CFHR3Q02985 330 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 AADACL4Q5VUY2 407 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 ZNF565Q8N9K5 539 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 MRGPRDQ8TDS7 321 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 FGGYQ96C11 551 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 OSBPL10Q9BXB5 764 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 GNB4Q9HAV0 340 aa13.65□□□□□ -0.22
CCDC40-211ENST00000574099 TRAV39A0A0B4J263 110 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 TRIM64CA6NLI5 447 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 H0YJX3 145 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 MPZL2O60487 215 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 IGHG4P01861 327 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 OR8U8P0C7N1 319 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 SPNP16150 400 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 EBI3Q14213 229 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 FAM53AQ6NSI3 398 aaPredicted RBP13.64□□□□□ -0.23
CCDC40-211ENST00000574099 IZUMO1Q8IYV9 350 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 ARHGAP24Q8N264 748 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 Q8N6K4 173 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 OR51T1Q8NGJ9 327 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 TMEM163Q8TC26 289 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 SPSB1Q96BD6 273 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 ISOC1Q96CN7 298 aa13.64□□□□□ -0.23
CCDC40-211ENST00000574099 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms