RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KIR3DP1A8MWS1 328 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 SLC33A1O00400 549 aaPredicted RBP13.46□□□□□ -0.26
NUP88-207ENST00000573584 GGNQ86UU5 652 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 KIAA1456Q9P272 454 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 LIPGQ9Y5X9 500 aa13.46□□□□□ -0.26
NUP88-207ENST00000573584 ZNF727A8MUV8 499 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 SCTP09683 121 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 S100PP25815 95 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 SRD5A2P31213 254 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 CXCL12P48061 93 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 DYNLT3P51808 116 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 OR8G5Q8NG78 346 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 RAB39BQ96DA2 213 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 MUCL1Q96DR8 90 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 TMPRSS5Q9H3S3 457 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 C9J4A7 227 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 TMEM50AO95807 157 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 TAGLN2P37802 199 aaKnown RBP13.45□□□□□ -0.26
NUP88-207ENST00000573584 KCNE4Q8WWG9 221 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 GPR35Q9HC97 309 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 MMP24Q9Y5R2 645 aa13.45□□□□□ -0.26
NUP88-207ENST00000573584 K7ESF4 209 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 NXPH3O95157 252 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 SRP19P09132 144 aaKnown RBP13.44□□□□□ -0.26
NUP88-207ENST00000573584 IL22RA1Q8N6P7 574 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 OR10D3Q8NH80 312 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 GNPNAT1Q96EK6 184 aaPredicted RBP13.44□□□□□ -0.26
NUP88-207ENST00000573584 Q9N2K0 584 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 ZMAT5Q9UDW3 170 aaKnown RBP13.44□□□□□ -0.26
NUP88-207ENST00000573584 ZNF732B4DXR9 585 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 HSD17B6O14756 317 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 BCL3P20749 454 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 VDAC1P21796 283 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 UBE2KP61086 200 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 RUNX1Q01196 453 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 KIAA0141Q14154 515 aaPredicted RBP13.44□□□□□ -0.26
NUP88-207ENST00000573584 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 CPEB3Q8NE35 698 aaKnown RBP13.44□□□□□ -0.26
NUP88-207ENST00000573584 NAT6Q93015 286 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 ABHD14BQ96IU4 210 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 SGCZQ96LD1 299 aa13.44□□□□□ -0.26
NUP88-207ENST00000573584 IGKV1D-13A0A0B4J2D9 117 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 H0YL77 283 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 PPIHO43447 177 aaKnown RBP13.43□□□□□ -0.26
NUP88-207ENST00000573584 CHST1O43916 411 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 TRAPPC6AO75865 159 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 P04436 131 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 FBP1P09467 338 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 RFPL3SP0C7P2 107 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 IGKV1-13P0DP09 117 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 EPHA1P21709 976 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 ID3Q02535 119 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 HLA-BQ31612 363 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 ACER2Q5QJU3 275 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 Q6ZS49 121 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 ODF3L1Q8IXM7 274 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 OR2Y1Q8NGV0 311 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 IFI44Q8TCB0 444 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 CPNE4Q96A23 557 aaPredicted RBP13.43□□□□□ -0.26
NUP88-207ENST00000573584 SPSB4Q96A44 273 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 POM121Q96HA1 1249 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 SIGLEC12Q96PQ1 595 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 C1QTNF5Q9BXJ0 243 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 FRYLO94915 3013 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 SLC22A20A6NK97 555 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 IGHV3-9P01782 118 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 CCL4P13236 92 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 CLDN15P56746 228 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 FAM209BQ5JX69 171 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 AKR1C8PQ5T2L2 129 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 ZNF429Q86V71 674 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 WNT16Q9UBV4 365 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 WRBO00258 174 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 HSPB6O14558 160 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 YIF1AO95070 293 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 NAPSAO96009 420 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
NUP88-207ENST00000573584 CCNOP22674 350 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 HAAOP46952 286 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 DLK1P80370 383 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 BAXQ07812 192 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 Q8NFD4 153 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 HS3ST6Q96QI5 342 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 CCL28Q9NRJ3 127 aa13.43□□□□□ -0.26
NUP88-207ENST00000573584 VPS13AQ96RL7 3174 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 CLEC18AA5D8T8 446 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A10PA6NDY2 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A18PA6NE21 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A16PA6NEW6 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A20PA6NIJ5 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A8PA6NJQ4 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A7PA6NKC0 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A22PA8MWA6 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A12PA8MX19 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A5PA8MXJ8 464 aa13.42□□□□□ -0.26
NUP88-207ENST00000573584 FAM90A23PA8MXZ1 464 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms