RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 EPG5Q9HCE0 2579 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 IGHV1-18A0A0C4DH31 117 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 A0A1W2PRD5 423 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 A0A1W2PRF3 423 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 A0A1W2PRM7 423 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 TNFSF12O43508 249 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 MPV17P39210 176 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 CEACAM6P40199 344 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 DYRK1AQ13627 763 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 TESK1Q15569 626 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 CDH26Q8IXH8 852 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 NABP1Q96AH0 204 aa8.68□□□□□ -1.02
SMG6-213ENST00000573166 TINAGL1Q9GZM7 467 aaPredicted RBP8.68□□□□□ -1.02
SMG6-213ENST00000573166 RALYQ9UKM9 306 aaKnown RBP8.68□□□□□ -1.02
SMG6-213ENST00000573166 TRBV5-7A0A0A0MS05 114 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 GYPAP02724 150 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 PRF1P14222 555 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 ACKR3P25106 362 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 EFNB2P52799 333 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 UBE2MP61081 183 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 RPL19P84098 196 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 CD200R1LQ6Q8B3 271 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 GVQW1Q8N7I0 195 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 OR10S1Q8NGN2 331 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 MFFQ9GZY8 342 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 C20orf85Q9H1P6 137 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 DKK4Q9UBT3 224 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 SF3B6Q9Y3B4 125 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 RBM11P57052 281 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 LGI3Q8N145 548 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 LYG1Q8N1E2 194 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 TPRX1Q8N7U7 411 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 PXT1Q8NFP0 134 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 SEC22AQ96IW7 307 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 CCL19Q99731 98 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 MTFP1Q9UDX5 166 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 FREM1Q5H8C1 2179 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 A0A0B4J293 547 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 IGHV1-69-2A0A0G2JMI3 117 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 ZNF705EA8MWA4 302 aaPredicted RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 SIX6O95475 246 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 CYB5R3P00387 301 aaPredicted RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 P2RY4P51582 365 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 P2RX3P56373 397 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 EFNB1P98172 346 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 SSBP1Q04837 148 aaKnown RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 AESQ08117 197 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 MUC20Q8N307 709 aaPredicted RBP8.67□□□□□ -1.02
SMG6-213ENST00000573166 ARRDC1Q8N5I2 433 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 OR4A16Q8NH70 328 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 TERB2Q8NHR7 220 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 WDFY2Q96P53 400 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 SEC22CQ9BRL7 303 aa8.67□□□□□ -1.02
SMG6-213ENST00000573166 PRR32B1ATL7 298 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 RAB27BO00194 218 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 CNIH1O95406 144 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ANXA7P20073 488 aaKnown RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 GZMHP20718 246 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 FGF12P61328 243 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 FAM209AQ5JX71 171 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TRAT1Q6PIZ9 186 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SLC25A10Q9UBX3 287 aaPredicted RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 PSG11Q9UQ72 335 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SHISA3A0PJX4 238 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 IFNA5P01569 189 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 KCNJ3P48549 501 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 RAP2BP61225 183 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ALKAL2Q6UX46 152 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 UNQ9370/PRO34162Q6UXP9 181 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 MOB3BQ86TA1 216 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SUMF2Q8NBJ7 301 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 C22orf15Q8WYQ4 148 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 MRPL24Q96A35 216 aaKnown RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 DDOQ99489 341 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 PKIBQ9C010 78 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 POFUT1Q9H488 388 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TAF9BQ9HBM6 251 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ZNF355PQ9NSJ1 428 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SPDEFO95238 335 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 CXCL3P19876 107 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 RPS16P62249 146 aaKnown RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 COL10A1Q03692 680 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ZNF154Q13106 437 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 ZCCHC24Q8N2G6 241 aaKnown RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 LILRB2Q8N423 598 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 CD300LFQ8TDQ1 290 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 RTN4IP1Q8WWV3 396 aaPredicted RBP8.66□□□□□ -1.02
SMG6-213ENST00000573166 SLX1AQ9BQ83 275 aa8.66□□□□□ -1.02
SMG6-213ENST00000573166 TMPRSS13Q9BYE2 586 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms