RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KCNJ3P48549 501 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 GABPB1Q06547 395 aaPredicted RBP13.93□□□□□ -0.18
SMG6-212ENST00000573153 AESQ08117 197 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 RIPK1Q13546 671 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 C17orf58Q2M2W7 97 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 PLA1AQ53H76 456 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 DDI2Q5TDH0 399 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 OR52W1Q6IF63 320 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 AHSA2Q719I0 299 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 RTN4RL2Q86UN3 420 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 SATL1Q86VE3 508 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 CDH26Q8IXH8 852 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 STX19Q8N4C7 294 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 NANOGP1Q8N7R0 232 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 OR13C5Q8NGS8 318 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 CFHR4Q92496 578 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 ORAI1Q96D31 301 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 CLEC7AQ9BXN2 247 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 PPIL3Q9H2H8 161 aaKnown RBP13.93□□□□□ -0.18
SMG6-212ENST00000573153 LINC00574Q9H8X3 128 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 SERTAD4Q9NUC0 356 aa13.93□□□□□ -0.18
SMG6-212ENST00000573153 A0A087X0M5 115 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 A0A1B0GX30 115 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 IGLV1-47P01700 117 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 GABRA5P31644 462 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 OR3A4PP47883 348 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 SCN1BQ07699 218 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 RSU1Q15404 277 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 SSX2Q16385 188 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 KRBOX4Q5JUW0 171 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 PRAMEF5Q5TYX0 476 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 Q6ZS46 218 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 TRAPPC6BQ86SZ2 158 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 LINC00596Q86U02 117 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 BPIFB6Q8NFQ5 453 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 NRG4Q8WWG1 115 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 THRSPQ92748 146 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 PAK1IP1Q9NWT1 392 aaPredicted RBP13.92□□□□□ -0.18
SMG6-212ENST00000573153 OR6C3Q9NZP0 311 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 CKLFQ9UBR5 152 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 FOXJ3Q9UPW0 622 aa13.92□□□□□ -0.18
SMG6-212ENST00000573153 MAGEA13PA6NCF6 341 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 ZNF729A6NN14 1252 aaPredicted RBP13.91□□□□□ -0.18
SMG6-212ENST00000573153 TIMM23O14925 209 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 MYL12BO14950 172 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 ZNF780AO75290 641 aaPredicted RBP13.91□□□□□ -0.18
SMG6-212ENST00000573153 CDK1P06493 297 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 CDK2P24941 298 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 HABP2Q14520 560 aaPredicted RBP13.91□□□□□ -0.18
SMG6-212ENST00000573153 C6orf141Q5SZD1 244 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 LYPD6Q86Y78 171 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 ZFP41Q8N8Y5 198 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 DTX3Q8N9I9 347 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 DERL3Q96Q80 235 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 METTL9Q9H1A3 318 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 MMP27Q9H306 513 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 ZNF286AQ9HBT8 521 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 TCF7L1Q9HCS4 588 aa13.91□□□□□ -0.18
SMG6-212ENST00000573153 NOTCH1P46531 2555 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 TRAV8-7A0A075B6U6 113 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 M0QZ24 198 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 CDRT1O95170 752 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 AQP4P55087 323 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 RBM11P57052 281 aaKnown RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 ATXN7L3Q14CW9 347 aaPredicted RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 PIGYQ3MUY2 71 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 PAN3Q58A45 887 aaKnown RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 RSBN1Q5VWQ0 802 aaPredicted RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 TMEM219Q86XT9 240 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 OSR2Q8N2R0 312 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 OR10K1Q8NGX5 313 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 PLPPR1Q8TBJ4 325 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 OR14A2Q96R54 314 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
SMG6-212ENST00000573153 FAM192AQ9GZU8 254 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 PCDHB16Q9NRJ7 776 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 ERGIC3Q9Y282 383 aa13.9□□□□□ -0.18
SMG6-212ENST00000573153 KBTBD11-OT1A0A1B0GTJ5 212 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 HTR3BO95264 441 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 CELP19835 753 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 HTR1DP28221 377 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 GPR176Q14439 515 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 FAM189A2Q15884 450 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 ABHD12Q8N2K0 398 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 KLHDC1Q8N7A1 406 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 OR4D6Q8NGJ1 314 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 OR4C13Q8NGP0 309 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 ZNF596Q8TC21 504 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 CYYR1Q96J86 154 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 NR1H4Q96RI1 486 aaPredicted RBP13.89□□□□□ -0.19
SMG6-212ENST00000573153 MND1Q9BWT6 205 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 BARHL1Q9BZE3 327 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 NPFFR1Q9GZQ6 430 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 WNT10AQ9GZT5 417 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 PITPNC1Q9UKF7 332 aa13.89□□□□□ -0.19
SMG6-212ENST00000573153 ST3GAL6Q9Y274 331 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms