RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PFDN5Q99471 154 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 COPS4Q9BT78 406 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 EFCAB11Q9BUY7 163 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 PAPOLGQ9BWT3 736 aaKnown RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 SRRQ9GZT4 340 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 METTL9Q9H1A3 318 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 SLC7A10Q9NS82 523 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 CCDC167Q9P0B6 97 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 EMCNQ9ULC0 261 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 GSTK1Q9Y2Q3 226 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 KCNIP3Q9Y2W7 256 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 TMED7Q9Y3B3 224 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 POLR3HQ9Y535 204 aaPredicted RBP4.31□□□□□ -1.72
SF3B3-214ENST00000572365 MMP24Q9Y5R2 645 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 NUBP2Q9Y5Y2 271 aa4.31□□□□□ -1.72
SF3B3-214ENST00000572365 C7orf66A4D0T2 115 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 C5orf51A6NDU8 294 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LINC00587B1AMM8 73 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 G3V2L1 256 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 TSTD3H0UI37 97 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SDHDO14521 159 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SLC31A2O15432 143 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LYRM1O43325 122 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SEC22BO75396 215 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RP2O75695 350 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MT-ND1P03886 318 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MT-ND2P03891 347 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 FCER2P06734 321 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 FGF4P08620 206 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CECR9P0C854 216 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF250P15622 560 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RAB3BP20337 219 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 AADACP22760 399 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ATP6V1E1P36543 226 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 TGFBR2P37173 567 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RIDAP52758 137 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ARFIP1P53367 373 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 UCP2P55851 309 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 AP3S2P59780 193 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 PRPS1P60891 318 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 PSPHP78330 225 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CCL8P80075 99 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NAAAQ02083 359 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DHODHQ02127 395 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 EMX2Q04743 252 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LIPEQ05469 1076 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SLC3A1Q07837 685 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DGCR6Q14129 220 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CD226Q15762 336 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DUSP5Q16690 384 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 HFEQ30201 348 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 VPS26BQ4G0F5 336 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ATP6AP1LQ52LC2 224 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 IFI44LQ53G44 452 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 PYDC2Q56P42 97 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NHLRC3Q5JS37 347 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 THEM4Q5T1C6 240 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 TSPO2Q5TGU0 170 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MEDAGQ5VYS4 303 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RNLSQ5VYX0 342 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NXNL2Q5VZ03 156 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LAMTOR1Q6IAA8 161 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SLC48A1Q6P1K1 146 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CBLN3Q6UW01 205 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CASP12Q6UXS9 341 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 BAIAP2L2Q6UXY1 529 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LAX1Q8IWV1 398 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SLC43A2Q8N370 569 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF561Q8N587 486 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DEFB108BQ8NET1 73 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 OR4F6Q8NGB9 312 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 OR4M1Q8NGD0 313 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 OR2T4Q8NH00 348 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ZNF675Q8TD23 568 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MRGPRDQ8TDS7 321 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 GLYATL2Q8WU03 294 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SELENOMQ8WWX9 145 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 RDH5Q92781 318 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 WDR34Q96EX3 536 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CERS2Q96G23 380 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DIRAS2Q96HU8 199 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 DUX3Q96PT4 197 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 LITAFQ99732 161 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 MRPL37Q9BZE1 423 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 WDR55Q9H6Y2 383 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NIT2Q9NQR4 276 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 NECAP2Q9NVZ3 263 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 FAM120CQ9NX05 1096 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 PLEK2Q9NYT0 353 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 TAS2R16Q9NYV7 291 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 METTL1Q9UBP6 276 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SNX6Q9UNH7 406 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SAMD4AQ9UPU9 718 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 SIGLEC9Q9Y336 463 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 CHTOPQ9Y3Y2 248 aaKnown RBP4.3□□□□□ -1.72
SF3B3-214ENST00000572365 PYGO1Q9Y3Y4 419 aa4.3□□□□□ -1.72
SF3B3-214ENST00000572365 ALG5Q9Y673 324 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms