RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 ARHGAP21Q5T5U3 1957 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 FTH1P19P0C7X4 201 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 RAC2P15153 192 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 PIK3IP1Q96FE7 263 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 NSG2Q9Y328 171 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 KCNMB2Q9Y691 235 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 A0A0U1RQV5 110 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 SYNGR3O43761 229 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM127O75204 238 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM267Q0VDI3 215 aaPredicted RBP13.98□□□□□ -0.17
RAB40B-206ENST00000571995 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
RAB40B-206ENST00000571995 LCN15Q6UWW0 184 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 GGNQ86UU5 652 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 SF3B5Q9BWJ5 86 aaKnown RBP13.98□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM131Q92545 1883 aa13.98□□□□□ -0.17
RAB40B-206ENST00000571995 PRF1P14222 555 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 H3F3AP84243 136 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 OVCH2Q7RTZ1 564 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 FAM58AQ8N1B3 248 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 SLC35G3Q8N808 338 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 OR2G3Q8NGZ4 309 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 SNIP1Q8TAD8 396 aaKnown RBP13.97□□□□□ -0.17
RAB40B-206ENST00000571995 MRGPRDQ8TDS7 321 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 RASL12Q9NYN1 266 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 CRIM1Q9NZV1 1036 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ABCD4O14678 606 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 TERTO14746 1132 aaKnown RBP13.97□□□□□ -0.17
RAB40B-206ENST00000571995 PPYP01298 95 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ZP3P21754 424 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 MIDNQ504T8 468 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 AKR1C8PQ5T2L2 129 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 PRSS54Q6PEW0 395 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 TMEM54Q969K7 222 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ERGIC1Q969X5 290 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 Q96M66 194 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ZPBPQ9BS86 351 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 RAB18Q9NP72 206 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 GHRLQ9UBU3 117 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 LHX6Q9UPM6 363 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 LOC102723996A0A087X1L8 192 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ZFP92A6NM28 416 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 ZNF716A6NP11 495 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 GP1BAP07359 652 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 RUNX1Q01196 453 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 FOXC1Q12948 553 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 SLC25A40Q8TBP6 338 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 MRGPRFQ96AM1 343 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 BSCL2Q96G97 398 aaPredicted RBP13.97□□□□□ -0.17
RAB40B-206ENST00000571995 NAA60Q9H7X0 242 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 SPACA1Q9HBV2 294 aa13.97□□□□□ -0.17
RAB40B-206ENST00000571995 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 CSRP1P21291 193 aaKnown RBP13.96□□□□□ -0.17
RAB40B-206ENST00000571995 TESK1Q15569 626 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 CXorf66Q5JRM2 361 aaPredicted RBP13.96□□□□□ -0.17
RAB40B-206ENST00000571995 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 SVBPQ8N300 66 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 MFSD2BA6NFX1 497 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 IFNA5P01569 189 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 IFNA17P01571 189 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 OPN1MWP04001 364 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 OPN1MW2P0DN77 364 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 OPN1MW3P0DN78 364 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 SLC25A53Q5H9E4 307 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 PTX4Q96A99 478 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 MRPS24Q96EL2 167 aaKnown RBP13.96□□□□□ -0.17
RAB40B-206ENST00000571995 PIGMQ9H3S5 423 aa13.96□□□□□ -0.17
RAB40B-206ENST00000571995 ZNF703Q9H7S9 590 aaPredicted RBP13.96□□□□□ -0.17
RAB40B-206ENST00000571995 LOC390937A0A1W2PQ73 354 aa13.96□□□□□ -0.18
RAB40B-206ENST00000571995 MSTNO14793 375 aa13.96□□□□□ -0.18
RAB40B-206ENST00000571995 CD59P13987 128 aa13.96□□□□□ -0.18
RAB40B-206ENST00000571995 ARR3P36575 388 aa13.96□□□□□ -0.18
RAB40B-206ENST00000571995 SUPT4H1P63272 117 aaKnown RBP13.96□□□□□ -0.18
RAB40B-206ENST00000571995 QRFPP83859 136 aa13.96□□□□□ -0.18
RAB40B-206ENST00000571995 IGHV3OR15-7A0A075B7D8 119 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 WNT9BO14905 357 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 WISP2O76076 250 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 CEACAM6P40199 344 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 GNG3P63215 75 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 WFDC8Q8IUA0 241 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 RBMXL1Q96E39 390 aaKnown RBP13.95□□□□□ -0.18
RAB40B-206ENST00000571995 C14orf79Q96F83 325 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 OPN3Q9H1Y3 402 aaPredicted RBP13.95□□□□□ -0.18
RAB40B-206ENST00000571995 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 KCNJ16Q9NPI9 418 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 CEBPZOSA8MTT3 80 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 PPP1CBP62140 327 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 AESQ08117 197 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 C10orf128Q5T292 105 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 ZNF573Q86YE8 665 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 MUCL1Q96DR8 90 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 RNF126Q9BV68 326 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.95□□□□□ -0.18
RAB40B-206ENST00000571995 OR3A1P47881 315 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 RBM11P57052 281 aaKnown RBP13.95□□□□□ -0.18
RAB40B-206ENST00000571995 OR2B8PP59922 312 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 ADAM5Q6NVV9 412 aa13.95□□□□□ -0.18
RAB40B-206ENST00000571995 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
RAB40B-206ENST00000571995 THNSL2Q86YJ6 484 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms