RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 COQ2Q96H96 371 aa12.34□□□□□ -0.43
TSR1-202ENST00000571806 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
TSR1-202ENST00000571806 MYRFQ9Y2G1 1151 aa12.34□□□□□ -0.43
TSR1-202ENST00000571806 DNAH3Q8TD57 4116 aa12.34□□□□□ -0.43
TSR1-202ENST00000571806 WI2-2373I1.2A0A1W2PRP0 233 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 J3QR06 171 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 J3QRE1 110 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 CGB3P0DN86 165 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 CGB7P0DN87 165 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 TMEM225BP0DP42 221 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 NFYBP25208 207 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 GDNFP39905 211 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 KCNJ3P48549 501 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 THBS3P49746 956 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 GP2P55259 537 aaKnown RBP12.33□□□□□ -0.44
TSR1-202ENST00000571806 NANOS3P60323 173 aaKnown RBP12.33□□□□□ -0.44
TSR1-202ENST00000571806 RPL23AP62750 156 aaKnown RBP12.33□□□□□ -0.44
TSR1-202ENST00000571806 SLC35B1P78383 322 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 PAX5Q02548 391 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 KISS1Q15726 138 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 ELP2Q6IA86 826 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 C10orf99Q6UWK7 81 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
TSR1-202ENST00000571806 OR8H3Q8N146 312 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 ACBD7Q8N6N7 88 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 OR5D18Q8NGL1 313 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 OR13C9Q8NGT0 318 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 KIRREL1Q96J84 757 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 B9D2Q9BPU9 175 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 OAZ3Q9UMX2 235 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 ORC6Q9Y5N6 252 aa12.33□□□□□ -0.44
TSR1-202ENST00000571806 SULT1B1O43704 296 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 SNRNP70P08621 437 aaKnown RBP12.32□□□□□ -0.44
TSR1-202ENST00000571806 HCKP08631 526 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 MYCNOSP40205 109 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 SNRPGP62308 76 aaKnown RBP12.32□□□□□ -0.44
TSR1-202ENST00000571806 MRPL28Q13084 256 aaKnown RBP12.32□□□□□ -0.44
TSR1-202ENST00000571806 ALKBH1Q13686 389 aaKnown RBP12.32□□□□□ -0.44
TSR1-202ENST00000571806 ATXN7L3Q14CW9 347 aaPredicted RBP12.32□□□□□ -0.44
TSR1-202ENST00000571806 CDK5R1Q15078 307 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 C1orf146Q5VVC0 180 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 PXT1Q8NFP0 134 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 RNFT2Q96EX2 444 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 SPACA5Q96QH8 159 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 ZNF649Q9BS31 505 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 CALYQ9NYX4 217 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 IDI2-AS1Q9NZ38 188 aa12.32□□□□□ -0.44
TSR1-202ENST00000571806 KIAA2026Q5HYC2 2103 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 MEIKINA0A087WXM9 373 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 OR4C45A6NMZ5 311 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 H0YJX3 145 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 J3QLW9 94 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 MAGEB3O15480 346 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 ATP5HO75947 161 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 IL1AP01583 271 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 ZNF19P17023 458 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 TMEM11P17152 192 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 HOXD3P31249 432 aaPredicted RBP12.31□□□□□ -0.44
TSR1-202ENST00000571806 ZP1P60852 638 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 HES1Q14469 280 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
TSR1-202ENST00000571806 ZNF329Q86UD4 541 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 C5orf56Q8N8D9 126 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 OR51A4Q8NGJ6 313 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 CNIH3Q8TBE1 160 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 WWC2-AS2Q96NR7 200 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 PPIL3Q9H2H8 161 aaKnown RBP12.31□□□□□ -0.44
TSR1-202ENST00000571806 ING3Q9NXR8 418 aa12.31□□□□□ -0.44
TSR1-202ENST00000571806 EXOGQ9Y2C4 368 aaKnown RBP12.31□□□□□ -0.44
TSR1-202ENST00000571806 SH2D7A6NKC9 451 aaPredicted RBP12.3□□□□□ -0.44
TSR1-202ENST00000571806 TMEM212A6NML5 194 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 NUDT19A8MXV4 375 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 RAMP3O60896 148 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 IGHG2P01859 326 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 GLP1RP43220 463 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 GALEQ14376 348 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 ZNF691Q5VV52 312 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 OR10AC1Q8NH08 325 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 C4orf36Q96KX1 117 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 KIF25Q9UIL4 384 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 PSG11Q9UQ72 335 aa12.3□□□□□ -0.44
TSR1-202ENST00000571806 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
TSR1-202ENST00000571806 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
TSR1-202ENST00000571806 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
TSR1-202ENST00000571806 GZMHP20718 246 aa12.29□□□□□ -0.44
TSR1-202ENST00000571806 C11orf87Q6NUJ2 197 aa12.29□□□□□ -0.44
TSR1-202ENST00000571806 TEX38Q6PEX7 206 aa12.29□□□□□ -0.44
TSR1-202ENST00000571806 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms