RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HSPB6O14558 160 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 MMP23AO75900 390 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CD33P20138 364 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 GTF2A1P52655 376 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 PPP3R1P63098 170 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 HABP2Q14520 560 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CDK5R1Q15078 307 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CCDC58Q4VC31 144 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 PAN3Q58A45 887 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CCBE1Q6UXH8 406 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 SATL1Q86VE3 508 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 KRTAP19-1Q8IUB9 90 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 Q8N2B8 174 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 PXT1Q8NFP0 134 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR4D6Q8NGJ1 314 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR51A2Q8NGJ7 313 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CHAC2Q8WUX2 184 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CYGBQ8WWM9 190 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 RGP1Q92546 391 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 CORO2AQ92828 525 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 COQ2Q96H96 371 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 NR1H4Q96RI1 486 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 PRSS22Q9GZN4 317 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 TAS2R4Q9NYW5 299 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR6C3Q9NZP0 311 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 MEGF11A6BM72 1044 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 GABRPO00591 440 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 FBXO24O75426 580 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 ALDOBP05062 364 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 JUNBP17275 347 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 GLP1RP43220 463 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 ETV1P50549 477 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 BDH1Q02338 343 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 MED21Q13503 144 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 RSU1Q15404 277 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 LRRC36Q1X8D7 754 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 TMEM95Q3KNT9 176 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR2G6Q5TZ20 316 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 XAF1Q6GPH4 301 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 ELP2Q6IA86 826 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF529Q6P280 563 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 BAIAP2L2Q6UXY1 529 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 THNSL2Q86YJ6 484 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 SETD9Q8NE22 299 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 CNIH3Q8TBE1 160 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 CAPSLQ8WWF8 208 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 CFHR4Q92496 578 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 TMEM106AQ96A25 262 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 CREB3L1Q96BA8 519 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 AKR1E2Q96JD6 320 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 PPIL3Q9H2H8 161 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 C8orf4Q9NR00 106 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 SERTAD4Q9NUC0 356 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 EXOSC1Q9Y3B2 195 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-205ENST00000570828 MEIKINA0A087WXM9 373 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 LEUTXA8MZ59 168 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 TOR1AO14656 332 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 CLIC3O95833 236 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 CD34P28906 385 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 BRS3P32247 399 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 CEACAM3P40198 252 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 VDAC2P45880 294 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 RBM39Q14498 530 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 IL13RA2Q14627 380 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 TM4SF20Q53R12 229 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 TTC23Q5W5X9 447 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR51T1Q8NGJ9 327 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR10K1Q8NGX5 313 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 SMIM19Q96E16 107 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR5M11Q96RB7 305 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF286AQ9HBT8 521 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 TMEM138Q9NPI0 162 aa9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 CHCHD3Q9NX63 227 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 DIMT1Q9UNQ2 313 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-205ENST00000570828 TRAV24A0A0B4J272 114 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 KRTAP4-8A0A0G2JLE6 195 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 FAM90A22PA8MWA6 464 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 IGLV1-47P01700 117 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 NFYBP25208 207 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 GDNFP39905 211 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR3A4PP47883 348 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 KCNJ3P48549 501 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 PRRX1P54821 245 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 HLA-DRB5Q30154 266 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 PIGYQ3MUY2 71 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 C16orf82Q7Z2V1 217 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 C1QL4Q86Z23 238 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 PACRGLQ8N7B6 248 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF565Q8N9K5 539 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 BARHL1Q9BZE3 327 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 BABAM2Q9NXR7 383 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 CALYQ9NYX4 217 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 CKLFQ9UBR5 152 aa9.92□□□□□ -0.82
CTDNEP1-205ENST00000570828 KIF25Q9UIL4 384 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms