RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ZNRF1Q8ND25 227 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 PLPPR1Q8TBJ4 325 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 MED30Q96HR3 178 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 LRBAP50851 2863 aa12.86□□□□□ -0.35
HERPUD1-219ENST00000570273 CSMD2Q7Z408 3487 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 CYSRT1A8MQ03 144 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 CEACAM18A8MTB9 384 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 IL7P13232 177 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 CBX5P45973 191 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 INPP1P49441 399 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 EDDM3AQ14507 147 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 BAK1Q16611 211 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM155Q4W5P6 130 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 C16orf87Q6PH81 154 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 SPICQ8N5J4 248 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 TRIM63Q969Q1 353 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 THAP7Q9BT49 309 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
HERPUD1-219ENST00000570273 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 TMEM30CPA0ZSE6 113 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 K7N7A8 449 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 MGST3O14880 152 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 LANCL1O43813 399 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 UPK1BO75841 260 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 RBBP9O75884 186 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 TK1P04183 234 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 FCER2P06734 321 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 RPS2P15880 293 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 DTYMKP23919 212 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 GIFP27352 417 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 RCVRNP35243 200 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 GDNFP39905 211 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 ACTBP60709 375 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 ACTG1P63261 375 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 DNM1P46Q6ZS02 220 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 FAM168AQ92567 244 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 PIMREGQ9BSJ6 248 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 SHARPINQ9H0F6 387 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 FAM234AQ9H0X4 552 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 KAAG1Q9UBP8 84 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 CTSZQ9UBR2 303 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 SPG11Q96JI7 2443 aa12.84□□□□□ -0.35
HERPUD1-219ENST00000570273 PDZD2O15018 2839 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 H7C1Q1 480 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 NDUFB3O43676 98 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 CSN2P05814 226 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 FCGR3AP08637 254 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 NDUFB7P17568 137 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 AESQ08117 197 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 DCTN2Q13561 401 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 LRRC10Q5BKY1 277 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 RSBN1Q5VWQ0 802 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 GDPD3Q7L5L3 318 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 GVQW1Q8N7I0 195 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 MRPL30Q8TCC3 161 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 MAFIPQ8WZ33 124 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 COQ2Q96H96 371 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 BPESC1Q9GZL8 116 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 SLC25A10Q9UBX3 287 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 KLK11Q9UBX7 282 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 MTFP1Q9UDX5 166 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 PCDHB10Q9UN67 800 aa12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 RBMX2Q9Y388 322 aaKnown RBP12.83□□□□□ -0.36
HERPUD1-219ENST00000570273 NDUFS8O00217 210 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 ORC5O43913 435 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 NAPSAO96009 420 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 P2RX3P56373 397 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 EDDM3BP56851 147 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 SSBP1Q04837 148 aaKnown RBP12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 ZNF57Q68EA5 555 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 SLC35E4Q6ICL7 350 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 NLRC3Q7RTR2 1065 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 OR8B3Q8NGG8 313 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 OR4K15Q8NH41 348 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 C10orf105Q8TEF2 133 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 NEIL1Q96FI4 390 aaPredicted RBP12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 OR8B2Q96RD0 313 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 OCSTAMPQ9BR26 566 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 ST6GALNAC5Q9BVH7 336 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 MIOXQ9UGB7 285 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 KIF25Q9UIL4 384 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 ANAPC10Q9UM13 185 aa12.82□□□□□ -0.36
HERPUD1-219ENST00000570273 MEIKINA0A087WXM9 373 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 LINC00854A0A1B0GVQ3 168 aa12.81□□□□□ -0.36
HERPUD1-219ENST00000570273 FUOMA2VDF0 154 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms