RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 FCRL1Q96LA6 429 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 FOXN4Q96NZ1 517 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 EPYCQ99645 322 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 NMUR2Q9GZQ4 415 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 CDC42EP4Q9H3Q1 356 aaKnown RBP2.5□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF556Q9HAH1 456 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 RRAGDQ9NQL2 400 aaPredicted RBP2.5□□□□□ -2.01
CNOT1-221ENST00000569924 C1orf109Q9NX04 203 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 IMPAD1Q9NX62 359 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 UBAP1Q9NZ09 502 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 CCDC59Q9P031 241 aaKnown RBP2.5□□□□□ -2.01
CNOT1-221ENST00000569924 TMEM216Q9P0N5 145 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 LGALS13Q9UHV8 139 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 KIF25Q9UIL4 384 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 POLR3HQ9Y535 204 aaPredicted RBP2.5□□□□□ -2.01
CNOT1-221ENST00000569924 TIMM22Q9Y584 194 aa2.5□□□□□ -2.01
CNOT1-221ENST00000569924 IGHV3-15A0A0B4J1V0 119 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 EXOC1LA0A1B0GW35 172 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CIB4A0PJX0 185 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CENPXA8MT69 81 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 RFXANKO14593 260 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TCF21O43680 179 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 MRPL33O75394 65 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SLC2A10O95528 541 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CLIC3O95833 236 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SERPINA5P05154 406 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 HMGN2P05204 90 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 GUSBP08236 651 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TACSTD2P09758 323 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 NEFHP12036 1026 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 MGMTP16455 207 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TBPP20226 339 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 KIR2DS2P43631 304 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 GSK3BP49841 420 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF83P51522 516 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 GPM6AP51674 278 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CRISP1P54107 249 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 FOXA1P55317 472 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 BIDP55957 195 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 DNAJB13P59910 316 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 UBE2MP61081 183 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 LMO4P61968 165 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SNRPD2P62316 118 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 RPL32P62910 135 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ADARB1P78563 741 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TGFBR3Q03167 851 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CKAP4Q07065 602 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 STX3Q13277 289 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SKP2Q13309 424 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TRAM2Q15035 370 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 QPRTQ15274 297 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF141Q15928 474 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 GABRA6Q16445 453 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 PSG3Q16557 428 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 RPEL1Q2QD12 228 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 NSUN5P1Q3KNT7 163 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF718Q3SXZ3 478 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF876PQ49A33 203 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CCNJQ5T5M9 372 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ANKRD26P1Q6NSI1 321 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 UFSP1Q6NVU6 142 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 C8orf74Q6P047 294 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 UGT2A3Q6UWM9 527 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 C12orf54Q6X4T0 127 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ACOT7LQ6ZUV0 252 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 NRMQ8IXM6 262 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 FTMTQ8N4E7 242 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CCNYL1Q8N7R7 359 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 WDR31Q8NA23 367 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ATP6V1C2Q8NEY4 427 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 OR2G2Q8NGZ5 317 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 PIGXQ8TBF5 258 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SFXN5Q8TD22 340 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TMEM234Q8WY98 164 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 OR5P2Q8WZ92 322 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CDS1Q92903 461 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ISOC2Q96AB3 205 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CCDC124Q96CT7 223 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZMYND19Q96E35 227 aaPredicted RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZHX1-C8orf76Q96EF9 292 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF317Q96PQ6 595 aaPredicted RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 SDF2Q99470 211 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 PAIP2Q9BPZ3 127 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CCDC28BQ9BUN5 200 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CHID1Q9BWS9 393 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 PLA2G12AQ9BZM1 189 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 EML4Q9HC35 981 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 RETNQ9HD89 108 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF275Q9NSD4 429 aaPredicted RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ACER3Q9NUN7 267 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 DCDC2Q9UHG0 476 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 ZNF229Q9UJW7 825 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 TRAPPC4Q9Y296 219 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 MRPS28Q9Y2Q9 187 aaKnown RBP2.49□□□□□ -2.01
CNOT1-221ENST00000569924 HDGFL3Q9Y3E1 203 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 CDH10Q9Y6N8 788 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 DYSFO75923 2080 aa2.49□□□□□ -2.01
CNOT1-221ENST00000569924 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms