RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FRYQ5TBA9 3013 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TRAV24A0A0B4J272 114 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KIR2DS1A0A191URI9 304 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 C13orf42A0A1B0GVH6 325 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KANTRA0A1W2PQU2 76 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 LRP5LA4QPB2 252 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MBD3L4A6NDZ8 208 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MBD3L3A6NE82 208 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MFSD2BA6NFX1 497 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MBD3L5A6NJ08 208 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM210A6NLX4 147 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 FAM25EA8MYX2 175 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 NPIPB11E5RHQ5 1161 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 CCSO14618 274 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TAAR5O14804 337 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MPPED1O15442 326 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SYNGR1O43759 233 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SMPD2O60906 423 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TNFSF13O75888 250 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 OR7C1O76099 320 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 DIRAS3O95661 229 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 IFNA21P01568 189 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 PI3P19957 117 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KITLGP21583 273 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 CA6P23280 308 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 LMO1P25800 156 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 GLP1RP43220 463 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KIR2DS4P43632 304 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 PSG7Q13046 419 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 BAMBIQ13145 260 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KIR2DS1Q14954 304 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF146Q15072 292 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SLC9A3R2Q15599 337 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 KRTCAP3Q53RY4 240 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 C6orf183Q5T699 404 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 HAGHLQ6PII5 290 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SLC22A25Q6T423 547 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 PDZD9Q8IXQ8 264 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 CISD2Q8N5K1 135 aaKnown RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 CCDC71LQ8N9Z2 235 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SPERTQ8NA61 448 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MBD3L2Q8NHZ7 208 aaPredicted RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 STOML3Q8TAV4 291 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 LRRC20Q8TCA0 184 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 ST8SIA2Q92186 375 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 SLAMF9Q96A28 289 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 STARD4Q96DR4 205 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MARS2Q96GW9 593 aaKnown RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 C18orf12Q96KH6 178 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM56Q96MV1 263 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 AQP10Q96PS8 301 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 RTL8AQ9BWD3 113 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 WDR13Q9H1Z4 485 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 METTL8Q9H825 291 aaKnown RBP4.58□□□□□ -1.68
SF3B3-213ENST00000569687 CYTL1Q9NRR1 136 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM100Q9NV29 134 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 RDH8Q9NYR8 311 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 MBD2Q9UBB5 411 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 TMEM56-RWDD3S4R434 201 aa4.58□□□□□ -1.68
SF3B3-213ENST00000569687 ZNF407Q9C0G0 2248 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 FREM1Q5H8C1 2179 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 MYO7BQ6PIF6 2116 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PIGBOS1A0A0B4J2F0 54 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 A0A1B0GW55 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 A8MXK9 166 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DEGS1O15121 323 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 KLK10O43240 276 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 FGF16O43320 207 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 WDR1O75083 606 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 ADAP1O75689 374 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 KNG1P01042 644 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PPYP01298 95 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 CRYABP02511 175 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 TK1P04183 234 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 CELA3BP08861 270 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 HOXB5P09067 269 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L2P0CJ85 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L3P0CJ86 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L4P0CJ87 422 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L5P0CJ88 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L6P0CJ89 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 DUX4L7P0CJ90 424 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PET100P0DJ07 73 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PGA5P0DJD9 388 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 AADACP22760 399 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 GNRHRP30968 328 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 CEACAM8P31997 349 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 TIMP3P35625 211 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 NUP62P37198 522 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 MDH2P40926 338 aaKnown RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 IDH3GP51553 393 aaPredicted RBP4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PIGPP57054 158 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 HERV-K104P61576 105 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 SRPXP78539 464 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 PDCD1Q15116 288 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 TESK1Q15569 626 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 AANATQ16613 207 aa4.57□□□□□ -1.68
SF3B3-213ENST00000569687 ABCA11PQ4W5N1 156 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms