RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 AWAT1Q58HT5 328 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 GLIPR1L1Q6UWM5 242 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 CEACAM19Q7Z692 300 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 LYPD6Q86Y78 171 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 DYRK2Q92630 601 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 MRPS24Q96EL2 167 aaKnown RBP11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 MGLLQ99685 303 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 UQCC2Q9BRT2 126 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 GAL3ST2Q9H3Q3 398 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 NCOR1P1Q9H4R4 102 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 IFT22Q9H7X7 185 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 ING3Q9NXR8 418 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 SESN1Q9Y6P5 492 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 TENM1Q9UKZ4 2725 aa11.24□□□□□ -0.61
HERPUD1-218ENST00000569569 A0A1W2PP11 408 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 HSPB6O14558 160 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 GEMIN2O14893 280 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 MRPS14O60783 128 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 CLPXO76031 633 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 OR7C1O76099 320 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 ARG1P05089 322 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 SRMP19623 302 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 MAP2K4P45985 399 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 TBCEQ15813 527 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 HSD17B12Q53GQ0 312 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 FAM27D1Q5T7N8 215 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 GLT8D1Q68CQ7 371 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF626Q68DY1 528 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 AWAT2Q6E213 333 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 OR52W1Q6IF63 320 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF565Q8N9K5 539 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 OR4D6Q8NGJ1 314 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 C17orf50Q8WW18 174 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 PHYHIPQ92561 330 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 FOXRED1Q96CU9 486 aaPredicted RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 TMEM133Q9H2Q1 129 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 OR6C3Q9NZP0 311 aa11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 TBL2Q9Y4P3 447 aaKnown RBP11.23□□□□□ -0.61
HERPUD1-218ENST00000569569 FAM90A8PA6NJQ4 464 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF729A6NN14 1252 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 ODF3BA8MYP8 253 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 MMP23AO75900 390 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 UCHL1P09936 223 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 PSMA1P25786 263 aaKnown RBP11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 CFPP27918 469 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 GABARAPL2P60520 117 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 PAX5Q02548 391 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 TAF9Q16594 264 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 AANATQ16613 207 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 TMEM91Q6ZNR0 172 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 LRRTM1Q86UE6 522 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 SUMF2Q8NBJ7 301 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 SSX3Q99909 188 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 DPCDQ9BVM2 203 aaPredicted RBP11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 YTHDF1Q9BYJ9 559 aaKnown RBP11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 SLITRK2Q9H156 845 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 PPIL3Q9H2H8 161 aaKnown RBP11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 GHRLQ9UBU3 117 aa11.22□□□□□ -0.61
HERPUD1-218ENST00000569569 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 GPR137BO60478 399 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 CGB3P0DN86 165 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 CGB7P0DN87 165 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 CDK2P24941 298 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 EMX1Q04741 257 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 ATAD3CQ5T2N8 411 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 RSBN1Q5VWQ0 802 aaPredicted RBP11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF367Q7RTV3 350 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 LHFPL4Q7Z7J7 247 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 PLPPR1Q8TBJ4 325 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 MALSU1Q96EH3 234 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 ACOT13Q9NPJ3 140 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 ZNF581Q9P0T4 197 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 KIF25Q9UIL4 384 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.61
HERPUD1-218ENST00000569569 ANK2Q01484 3957 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 KBTBD11-OT1A0A1B0GTJ5 212 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 A0A1B0GUS0 222 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A10PA6NDY2 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A18PA6NE21 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A16PA6NEW6 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A20PA6NIJ5 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A7PA6NKC0 464 aa11.2□□□□□ -0.62
HERPUD1-218ENST00000569569 FAM90A22PA8MWA6 464 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms