RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	ENTPD6	O75354	484 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	SNU13	P55769	128 aa	Known RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	GNB1	P62873	340 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	AES	Q08117	197 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	LRRC36	Q1X8D7	754 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	C17orf58	Q2M2W7	97 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	ZIK1	Q3SY52	487 aa	Predicted RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	DEGS2	Q6QHC5	323 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	TGIF2LX	Q8IUE1	241 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	ENTHD1	Q8IYW4	607 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	FAM71E2	Q8N5Q1	922 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	EME1	Q96AY2	570 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	C9orf16	Q9BUW7	83 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	TTTY10	Q9BZA0	68 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	SLC25A19	Q9HC21	320 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	LIN7C	Q9NUP9	197 aa	Known RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	TVP23B	Q9NYZ1	205 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	GLS2	Q9UI32	602 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.09	□□□□□ -0.31
PKM-223	ENST00000569050	KIAA2026	Q5HYC2	2103 aa		13.09	□□□□□ -0.31
PKM-223	ENST00000569050	NCBP2L	A6PVI3	153 aa	Known RBP	13.08	□□□□□ -0.32
PKM-223	ENST00000569050		H3BSH0	61 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	IGHV3-7	P01780	117 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	ALPL	P05186	524 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	CALCB	P10092	127 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	NFYB	P25208	207 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	POLR2I	P36954	125 aa	Known RBP	13.08	□□□□□ -0.32
PKM-223	ENST00000569050	NPBWR2	P48146	333 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	ALDH3A2	P51648	485 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	CDK5	Q00535	292 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	EBI3	Q14213	229 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	ZNF146	Q15072	292 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	PTGES3	Q15185	160 aa	Known RBP	13.08	□□□□□ -0.32
PKM-223	ENST00000569050	CATSPERD	Q86XM0	798 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	OR8H3	Q8N146	312 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050		Q8N1Y9	231 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050		Q8N9W7	124 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	LEAP2	Q969E1	77 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	OR5B12	Q96R08	314 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	TEX12	Q9BXU0	123 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	MRO	Q9BYG7	248 aa		13.08	□□□□□ -0.32
PKM-223	ENST00000569050	ODAM	A1E959	279 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050		A8MZ25	164 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050		J3QR06	171 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	RRP9	O43818	475 aa	Known RBP	13.07	□□□□□ -0.32
PKM-223	ENST00000569050	SRSF10	O75494	262 aa	Known RBP	13.07	□□□□□ -0.32
PKM-223	ENST00000569050	RAB7A	P51149	207 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	RUNX1	Q01196	453 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	KIAA0141	Q14154	515 aa	Predicted RBP	13.07	□□□□□ -0.32
PKM-223	ENST00000569050	UBE2V2	Q15819	145 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	LPCAT4	Q643R3	524 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050		Q6ZSR3	168 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	FAM58A	Q8N1B3	248 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050		Q8N6K4	173 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	BBS1	Q8NFJ9	593 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	OR6Q1	Q8NGQ2	317 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	LINC00476	Q8WZB0	136 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	ST6GALNAC6	Q969X2	333 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	KIRREL1	Q96J84	757 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	HSPB9	Q9BQS6	159 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	GABARAPL3	Q9BY60	117 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	KLK15	Q9H2R5	256 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	ENOPH1	Q9UHY7	261 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	GTF2A1L	Q9UNN4	478 aa		13.07	□□□□□ -0.32
PKM-223	ENST00000569050	TRBV2	A0A0J9YWF9	115 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	FUOM	A2VDF0	154 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	DHRS7C	A6NNS2	312 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	ZAR1L	A6NP61	321 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	PRODH	O43272	600 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	PRKY	O43930	277 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	OR2H2	O95918	312 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	HMGN1	P05114	100 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	PRKACA	P17612	351 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	BCL3	P20749	454 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	VDAC1	P21796	283 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	CDC42	P60953	191 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	RPS7	P62081	194 aa	Known RBP	13.06	□□□□□ -0.32
PKM-223	ENST00000569050	ROM1	Q03395	351 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	MADCAM1	Q13477	382 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	LYPD6	Q86Y78	171 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050		Q8IYB0	196 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	ZNF679	Q8IYX0	411 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	DDB2	Q92466	427 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	DLX4	Q92988	240 aa	Predicted RBP	13.06	□□□□□ -0.32
PKM-223	ENST00000569050	COQ2	Q96H96	371 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	EAF1	Q96JC9	268 aa	Predicted RBP	13.06	□□□□□ -0.32
PKM-223	ENST00000569050	UBE2E2	Q96LR5	201 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	KCTD7	Q96MP8	289 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	SLC29A1	Q99808	456 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	PRRG3	Q9BZD7	231 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	ING3	Q9NXR8	418 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	COPS3	Q9UNS2	423 aa		13.06	□□□□□ -0.32
PKM-223	ENST00000569050	IGHV3-72	A0A0B4J1Y9	119 aa		13.05	□□□□□ -0.32
PKM-223	ENST00000569050	ZNF729	A6NN14	1252 aa	Predicted RBP	13.05	□□□□□ -0.32
PKM-223	ENST00000569050	LOC110117498-PIK3R3	F6TDL0	507 aa		13.05	□□□□□ -0.32
PKM-223	ENST00000569050	IFNA6	P05013	189 aa		13.05	□□□□□ -0.32
PKM-223	ENST00000569050	SLC2A5	P22732	501 aa		13.05	□□□□□ -0.32
PKM-223	ENST00000569050	RIDA	P52758	137 aa	Known RBP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms