RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
USB1-214ENST00000568848 CHPT1Q8WUD6 406 aa11.64□□□□□ -0.55
USB1-214ENST00000568848 RCHY1Q96PM5 261 aa11.64□□□□□ -0.55
USB1-214ENST00000568848 HMG20AQ9NP66 347 aa11.64□□□□□ -0.55
USB1-214ENST00000568848 SORL1Q92673 2214 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 SLC33A1O00400 549 aaPredicted RBP11.63□□□□□ -0.55
USB1-214ENST00000568848 GATBO75879 557 aaKnown RBP11.63□□□□□ -0.55
USB1-214ENST00000568848 CEACAM3P40198 252 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 OR52W1Q6IF63 320 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 ADAMTSL5Q6ZMM2 481 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 OR4D6Q8NGJ1 314 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 CORO2AQ92828 525 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 FGGYQ96C11 551 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 CLN6Q9NWW5 311 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 ENOPH1Q9UHY7 261 aa11.63□□□□□ -0.55
USB1-214ENST00000568848 DHRS7CA6NNS2 312 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ZNF736B4DX44 427 aaPredicted RBP11.62□□□□□ -0.55
USB1-214ENST00000568848 KRT8P05787 483 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ATF1P18846 271 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 RBP2P50120 134 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ARHGDIBP52566 201 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ATP1B3P54709 279 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 PRRX1P54821 245 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 PDZK1IP1Q13113 114 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ZIK1Q3SY52 487 aaPredicted RBP11.62□□□□□ -0.55
USB1-214ENST00000568848 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 GID4Q8IVV7 300 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ENTHD1Q8IYW4 607 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 OR10H4Q8NGA5 316 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 OR51A4Q8NGJ6 313 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ITFG2Q969R8 447 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 NR1H4Q96RI1 486 aaPredicted RBP11.62□□□□□ -0.55
USB1-214ENST00000568848 HSPB9Q9BQS6 159 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 ZFP57Q9NU63 452 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 TAS2R3Q9NYW6 316 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 KIF25Q9UIL4 384 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 PSG11Q9UQ72 335 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 MYRFQ9Y2G1 1151 aa11.62□□□□□ -0.55
USB1-214ENST00000568848 A0A087X0M5 115 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 LCE6AA0A183 80 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 A0A1B0GX30 115 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 J3QR06 171 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 M0QZK8 103 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 EI24O14681 340 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 SH2D1BO14796 132 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 RAMP3O60896 148 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 IGHG2P01859 326 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 SSTR5P35346 364 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 GPR12P47775 334 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
USB1-214ENST00000568848 CDK5R1Q15078 307 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 C9orf66Q5T8R8 295 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 MOB3BQ86TA1 216 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 OR5M8Q8NGP6 311 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 OR9G1Q8NH87 305 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 PLPPR1Q8TBJ4 325 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 MRGPRDQ8TDS7 321 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 EME1Q96AY2 570 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 NEK6Q9HC98 313 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 CALYQ9NYX4 217 aa11.61□□□□□ -0.55
USB1-214ENST00000568848 WARS2Q9UGM6 360 aaKnown RBP11.61□□□□□ -0.55
USB1-214ENST00000568848 ZNF256Q9Y2P7 627 aaPredicted RBP11.61□□□□□ -0.55
USB1-214ENST00000568848 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
USB1-214ENST00000568848 METTL15A6NJ78 407 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 NCBP2LA6PVI3 153 aaKnown RBP11.6□□□□□ -0.55
USB1-214ENST00000568848 ALPLP05186 524 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 HTR1FP30939 366 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 NANOS3P60323 173 aaKnown RBP11.6□□□□□ -0.55
USB1-214ENST00000568848 ZNF85Q03923 595 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 LPCAT4Q643R3 524 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 CCDC144NLQ6NUI1 221 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 OR8J1Q8NGP2 316 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 OR13C9Q8NGT0 318 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 CYYR1Q96J86 154 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 MNTQ99583 582 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 ADI1Q9BV57 179 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 GNB4Q9HAV0 340 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 AASSQ9UDR5 926 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 GNG8Q9UK08 70 aa11.6□□□□□ -0.55
USB1-214ENST00000568848 MEIKINA0A087WXM9 373 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 KBTBD11-OT1A0A1B0GTJ5 212 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
USB1-214ENST00000568848 EBAG9O00559 213 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 KDM4BO94953 1096 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 CYB5AP00167 134 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 CGB3P0DN86 165 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 CGB7P0DN87 165 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 CDC42P60953 191 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 SLC35B1P78383 322 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 GPR50Q13585 617 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 ZSCAN26Q16670 478 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 ZFP1Q6P2D0 407 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 HAPLN4Q86UW8 402 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 FOXRED2Q8IWF2 684 aa11.59□□□□□ -0.55
USB1-214ENST00000568848 Q8IYB0 196 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms