RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 RNASE10Q5GAN6 216 aaKnown RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ATPAF1Q5TC12 328 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ELP2Q6IA86 826 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 Q6P435 159 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 GLDNQ6ZMI3 551 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 IDO2Q6ZQW0 420 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM200AQ86VY9 491 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 HOGA1Q86XE5 327 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SAXO1Q8IYX7 474 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 DRAXINQ8NBI3 349 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SCCPDHQ8NBX0 429 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ADAD2Q8NCV1 583 aaKnown RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 OR4K15Q8NH41 348 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF503Q96F45 646 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 CPNE2Q96FN4 548 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF747Q9BV97 191 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ST6GALNAC5Q9BVH7 336 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 PKIBQ9C010 78 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 PIGMQ9H3S5 423 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 CA10Q9NS85 328 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF701Q9NV72 531 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 PLEKHJ1Q9NW61 149 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 SLC2A8Q9NY64 477 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 COPZ2Q9P299 210 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF107Q9UII5 783 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 HSF4Q9ULV5 492 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 MEMO1Q9Y316 297 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 HRNRQ86YZ3 2850 aaPredicted RBP4.83□□□□□ -1.64
SF3B3-210ENST00000567654 ROS1P08922 2347 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 PKDREJQ9NTG1 2253 aa4.83□□□□□ -1.64
SF3B3-210ENST00000567654 NBASA2RRP1 2371 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TRAV24A0A0B4J272 114 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 A0A1B0GWJ7 208 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 LRP5LA4QPB2 252 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 NKX2-6A6NCS4 301 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 DPRXA6NFQ7 191 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 OR5H14A6NHG9 310 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZSCAN5BA6NJL1 495 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 SERPINE3A8MV23 424 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 DISC1C4P0D8 188 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TRAPPC2LH3BP13 241 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 CDIPTO14735 213 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 WNT9BO14905 357 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TIMM8AO60220 97 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF780AO75290 641 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 PDCD6O75340 191 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 CA11O75493 328 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 OR7C1O76099 320 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 RLN1P04808 185 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 IL5P05113 134 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 GRPP07492 148 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 PGA5P0DJD9 388 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF250P15622 560 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 EGR1P18146 543 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TNFRSF1AP19438 455 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 FAUP35544 74 aaKnown RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ERVK11-1P61568 191 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 OR8G1Q15617 311 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF718Q3SXZ3 478 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 FAM76BQ5HYJ3 339 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 NHLRC3Q5JS37 347 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 VAX1Q5SQQ9 334 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 AADACL3Q5VUY0 350 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF626Q68DY1 528 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF660Q6AZW8 331 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 RGS7BPQ6MZT1 257 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF573Q86YE8 665 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MKXQ8IYA7 352 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TCTE3Q8IZS6 198 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MUC20Q8N307 709 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 FTMTQ8N4E7 242 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 ST6GALNAC3Q8NDV1 305 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MARCH1Q8TCQ1 289 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM171Q8WVE6 324 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 DEDD2Q8WXF8 326 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM230Q96A57 120 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MRPS24Q96EL2 167 aaKnown RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 HIST1H2AAQ96QV6 131 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MICU1Q9BPX6 476 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 CMSS1Q9BQ75 279 aaKnown RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 VKORC1Q9BQB6 163 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 RTL8AQ9BWD3 113 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 MRPL37Q9BZE1 423 aaKnown RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 BCL2L14Q9BZR8 327 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 WDR13Q9H1Z4 485 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 PLSCR3Q9NRY6 295 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM100Q9NV29 134 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 OSGIN2Q9Y236 505 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 TET2Q6N021 2002 aaPredicted RBP4.82□□□□□ -1.64
SF3B3-210ENST00000567654 DCHS2Q6V1P9 2916 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 PKD1L2Q7Z442 2459 aa4.82□□□□□ -1.64
SF3B3-210ENST00000567654 IGLV3-9A0A075B6K5 115 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MEIKINA0A087WXM9 373 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 TRAV39A0A0B4J263 110 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 C16orf97H3BN30 126 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms