RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
COMMD4-216ENST00000567023 DNAH3Q8TD57 4116 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 IRGMA1A4Y4 181 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
COMMD4-216ENST00000567023 ADARB2-AS1A8MUL3 147 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 G3V4G9 280 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 LY6LH3BQJ8 138 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 BUB1B-PAK6H3BSN5 160 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 ALDOBP05062 364 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 BRS3P32247 399 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 PTGFRP43088 359 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 AQP4P55087 323 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 C17orf58Q2M2W7 97 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 CCDC58Q4VC31 144 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 ZNF565Q8N9K5 539 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 OR4D6Q8NGJ1 314 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 AKR1E2Q96JD6 320 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 LINC00574Q9H8X3 128 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 PLCXD1Q9NUJ7 323 aa11.41□□□□□ -0.58
COMMD4-216ENST00000567023 KBTBD11-OT1A0A1B0GTJ5 212 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 OOSP1A8MZH6 123 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 H0YHG0 523 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 PEX14O75381 377 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 RAB3AP20336 220 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 GDNFP39905 211 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 CEACAM3P40198 252 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 VDAC2P45880 294 aaPredicted RBP11.4□□□□□ -0.58
COMMD4-216ENST00000567023 ETV1P50549 477 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 ARHGDIBP52566 201 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
COMMD4-216ENST00000567023 PRRX1P54821 245 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 HLA-DRB5Q30154 266 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.58
COMMD4-216ENST00000567023 ZNF286AQ9HBT8 521 aa11.4□□□□□ -0.58
COMMD4-216ENST00000567023 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
COMMD4-216ENST00000567023 TRAV24A0A0B4J272 114 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 GABRPO00591 440 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 MAGEB3O15480 346 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 XPNPEP2O43895 674 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 KCNJ3P48549 501 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 CD83Q01151 205 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 IL13RA2Q14627 380 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 ATXN7L3Q14CW9 347 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 RPL22L1Q6P5R6 122 aaKnown RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 OR4F17Q8NGA8 305 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 OR51A2Q8NGJ7 313 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 GPR148Q8TDV2 347 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 TSEN15Q8WW01 171 aaKnown RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 RGP1Q92546 391 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 GGHQ92820 318 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 KIRREL1Q96J84 757 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 RBM14Q96PK6 669 aaKnown RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 OR4F4Q96R69 305 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 OR5M11Q96RB7 305 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 BARHL1Q9BZE3 327 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 MMP28Q9H239 520 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 PPIL3Q9H2H8 161 aaKnown RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 CNOT2Q9NZN8 540 aaKnown RBP11.39□□□□□ -0.59
COMMD4-216ENST00000567023 PSORS1C1Q9UIG5 152 aa11.39□□□□□ -0.59
COMMD4-216ENST00000567023 EFCAB10A6NFE3 127 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 NPIPB11E5RHQ5 1161 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 TOR1AO14656 332 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 OR2F2O95006 317 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 AMY1AP04745 511 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 AMY2AP04746 511 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 CD2P06729 351 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 CD24P25063 80 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 C21orf33P30042 268 aaPredicted RBP11.38□□□□□ -0.59
COMMD4-216ENST00000567023 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 XAF1Q6GPH4 301 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 CCDC144NLQ6NUI1 221 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 OR9G1Q8NH87 305 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 TNFAIP8L1Q8WVP5 186 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 TMEM80Q96HE8 168 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 VCX3BQ9H321 246 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 IFT22Q9H7X7 185 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 FKBP14Q9NWM8 211 aa11.38□□□□□ -0.59
COMMD4-216ENST00000567023 EXOSC1Q9Y3B2 195 aaKnown RBP11.38□□□□□ -0.59
COMMD4-216ENST00000567023 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM172BPA6NC97 362 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A18PA6NE21 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A16PA6NEW6 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A20PA6NIJ5 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A9PA6NNJ1 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A12PA8MX19 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A5PA8MXJ8 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 OGG1O15527 345 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 ATP6V1G2O95670 118 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A15PP0C7V4 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A13PP0C7W8 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A14PP0C7W9 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 FAM90A24PP0C7X0 464 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 MNDAP41218 407 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 SOX2P48431 317 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 ST3GAL4Q11206 333 aa11.37□□□□□ -0.59
COMMD4-216ENST00000567023 RSU1Q15404 277 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms