RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 NDNFQ8TB73 568 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 FBLIM1Q8WUP2 373 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 PGLYRP3Q96LB9 341 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 GPER1Q99527 375 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 GAL3ST2Q9H3Q3 398 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 C8orf4Q9NR00 106 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 ABCB10Q9NRK6 738 aa11.77□□□□□ -0.53
FANCA-220ENST00000566409 TRBV5-5A0A0J9YX44 114 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 IRGMA1A4Y4 181 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 MAGEA13PA6NCF6 341 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 CASQ2O14958 399 aaPredicted RBP11.76□□□□□ -0.53
FANCA-220ENST00000566409 MAGEB3O15480 346 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 XPNPEP2O43895 674 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 CD2P06729 351 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 MYL12AP19105 171 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 CD24P25063 80 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 HTR1DP28221 377 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 CD34P28906 385 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 PTGFRP43088 359 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 PAN3Q58A45 887 aaKnown RBP11.76□□□□□ -0.53
FANCA-220ENST00000566409 OR52W1Q6IF63 320 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 SETD9Q8NE22 299 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 OR13A1Q8NGR1 328 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 OR52N1Q8NH53 320 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 FAM110DQ8TAY7 271 aaPredicted RBP11.76□□□□□ -0.53
FANCA-220ENST00000566409 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 WIPF2Q8TF74 440 aaPredicted RBP11.76□□□□□ -0.53
FANCA-220ENST00000566409 FAM192AQ9GZU8 254 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 TMEM138Q9NPI0 162 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 KIF25Q9UIL4 384 aa11.76□□□□□ -0.53
FANCA-220ENST00000566409 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 TRAV8-7A0A075B6U6 113 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 A0A087X0M5 115 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 KBTBD11-OT1A0A1B0GTJ5 212 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 A0A1B0GX30 115 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
FANCA-220ENST00000566409 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 F2RL2O00254 374 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 GPX5O75715 221 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 HTR3BO95264 441 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 C21orf33P30042 268 aaPredicted RBP11.75□□□□□ -0.53
FANCA-220ENST00000566409 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
FANCA-220ENST00000566409 CAPGP40121 348 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 IL13RA2Q14627 380 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 RSU1Q15404 277 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 DDI2Q5TDH0 399 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 RSBN1Q5VWQ0 802 aaPredicted RBP11.75□□□□□ -0.53
FANCA-220ENST00000566409 C11orf88Q6PI97 169 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 RTN4RL2Q86UN3 420 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 KIRREL1Q96J84 757 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 LINC00574Q9H8X3 128 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 PITPNC1Q9UKF7 332 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 HSPE1-MOB4S4R3N1 261 aa11.75□□□□□ -0.53
FANCA-220ENST00000566409 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 TRAV39A0A0B4J263 110 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 A0A1W2PP11 408 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 BDKRB2P30411 391 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 PAX5Q02548 391 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 HLA-DRB5Q30154 266 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 Q6ZTK2 550 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 C8orf59Q8N0T1 100 aaPredicted RBP11.74□□□□□ -0.53
FANCA-220ENST00000566409 OR4D6Q8NGJ1 314 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 ZNF596Q8TC21 504 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 CPNE2Q96FN4 548 aaPredicted RBP11.74□□□□□ -0.53
FANCA-220ENST00000566409 NCOR1P1Q9H4R4 102 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 PLCXD1Q9NUJ7 323 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 OR6C3Q9NZP0 311 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 ING4Q9UNL4 249 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 ST3GAL6Q9Y274 331 aa11.74□□□□□ -0.53
FANCA-220ENST00000566409 TRBV5-7A0A0A0MS05 114 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 A0A1W2PPK0 400 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 BUB1B-PAK6H3BSN5 160 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 GEMIN2O14893 280 aaKnown RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 CSF1P09603 554 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 GLP1RP43220 463 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 RBM11P57052 281 aaKnown RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 PPP3R1P63098 170 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 RIPK1Q13546 671 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 TMEM95Q3KNT9 176 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 Q499Y3 187 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 YIF1BQ5BJH7 314 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 NHLRC3Q5JS37 347 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 ZNF565Q8N9K5 539 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 OR14A2Q96R54 314 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 ZNF184Q99676 751 aaPredicted RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 DPCDQ9BVM2 203 aaPredicted RBP11.73□□□□□ -0.53
FANCA-220ENST00000566409 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 PRSS22Q9GZN4 317 aa11.73□□□□□ -0.53
FANCA-220ENST00000566409 WNT10AQ9GZT5 417 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms