RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 KLHL22Q53GT1 634 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 OXLD1Q5BKU9 147 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 XAF1Q6GPH4 301 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 OR5AU1Q8NGC0 362 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 OR13A1Q8NGR1 328 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 OR10K1Q8NGX5 313 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 STMN2Q93045 179 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 KIRREL1Q96J84 757 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 SLC25A33Q9BSK2 321 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 JAM3Q9BX67 310 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 FGF20Q9NP95 211 aaPredicted RBP14.63□□□□□ -0.07
USB1-213ENST00000566292 TAS2R4Q9NYW5 299 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 OR6C3Q9NZP0 311 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 KIF25Q9UIL4 384 aa14.63□□□□□ -0.07
USB1-213ENST00000566292 KBTBD11-OT1A0A1B0GTJ5 212 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 H3BUI4 141 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 TOR1AO14656 332 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 OR2F2O95006 317 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 AMY1AP04745 511 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 AMY2AP04746 511 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 GLP1RP43220 463 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 PAN3Q58A45 887 aaKnown RBP14.62□□□□□ -0.07
USB1-213ENST00000566292 SATL1Q86VE3 508 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 Q8NFD4 153 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 OR4F17Q8NGA8 305 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 CNIH3Q8TBE1 160 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 HAVCR2Q8TDQ0 301 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 TNFAIP8L1Q8WVP5 186 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 AKR1E2Q96JD6 320 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 RBM14Q96PK6 669 aaKnown RBP14.62□□□□□ -0.07
USB1-213ENST00000566292 OR4F4Q96R69 305 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 GPER1Q99527 375 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 ZNF581Q9P0T4 197 aa14.62□□□□□ -0.07
USB1-213ENST00000566292 SH2D7A6NKC9 451 aaPredicted RBP14.61□□□□□ -0.07
USB1-213ENST00000566292 XPNPEP2O43895 674 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 NFYBP25208 207 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 CEACAM3P40198 252 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 OR3A4PP47883 348 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 ETV1P50549 477 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 PRRX1P54821 245 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 RBM39Q14498 530 aaKnown RBP14.61□□□□□ -0.07
USB1-213ENST00000566292 IL13RA2Q14627 380 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 PIGYQ3MUY2 71 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 ABCA11PQ4W5N1 156 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 TCTEX1D4Q5JR98 221 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 RSBN1Q5VWQ0 802 aaPredicted RBP14.61□□□□□ -0.07
USB1-213ENST00000566292 RPL22L1Q6P5R6 122 aaKnown RBP14.61□□□□□ -0.07
USB1-213ENST00000566292 ASCL4Q6XD76 172 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 OR9G1Q8NH87 305 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 PLPPR1Q8TBJ4 325 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 CREB3L1Q96BA8 519 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 NCOR1P1Q9H4R4 102 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 CALYQ9NYX4 217 aa14.61□□□□□ -0.07
USB1-213ENST00000566292 MEIKINA0A087WXM9 373 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 A0A1W2PRX2 142 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 MAGEB3O15480 346 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 LPLP06858 475 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 ARHGDIBP52566 201 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 OR2G6Q5TZ20 316 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 GPR148Q8TDV2 347 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 LEAP2Q969E1 77 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 CPNE2Q96FN4 548 aaPredicted RBP14.6□□□□□ -0.07
USB1-213ENST00000566292 FAM192AQ9GZU8 254 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 LINC00574Q9H8X3 128 aa14.6□□□□□ -0.07
USB1-213ENST00000566292 SIRT4Q9Y6E7 314 aaPredicted RBP14.6□□□□□ -0.07
USB1-213ENST00000566292 OOSP1A8MZH6 123 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 CDRT1O95170 752 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 HTR3BO95264 441 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 IL1AP01583 271 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 IGHV3-7P01780 117 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 PAX5Q02548 391 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 RSU1Q15404 277 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 CCDC58Q4VC31 144 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 CCDC144NLQ6NUI1 221 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 C10orf99Q6UWK7 81 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 Q6ZPA2 131 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 CENPVQ7Z7K6 275 aaPredicted RBP14.59□□□□□ -0.07
USB1-213ENST00000566292 ZNF565Q8N9K5 539 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 ZNF555Q8NEP9 628 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 MRGPRDQ8TDS7 321 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 CAPSLQ8WWF8 208 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 TMEM106AQ96A25 262 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 ORAI1Q96D31 301 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 BARHL1Q9BZE3 327 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 SMPD3Q9NY59 655 aaPredicted RBP14.59□□□□□ -0.07
USB1-213ENST00000566292 IDI2-AS1Q9NZ38 188 aa14.59□□□□□ -0.07
USB1-213ENST00000566292 FAM90A18PA6NE21 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A16PA6NEW6 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A20PA6NIJ5 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A9PA6NNJ1 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A12PA8MX19 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A5PA8MXJ8 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 NPIPB11E5RHQ5 1161 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 J3QR06 171 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 BAG2O95816 211 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 CLIC3O95833 236 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 CD2P06729 351 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A15PP0C7V4 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A13PP0C7W8 464 aa14.58□□□□□ -0.08
USB1-213ENST00000566292 FAM90A14PP0C7W9 464 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms