RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 GHRLQ9UBU3 117 aa11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 AK6Q9Y3D8 172 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-210ENST00000565966 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A087WXM4 84 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PRD5 423 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PRF3 423 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 A0A1W2PRM7 423 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 SHISA3A0PJX4 238 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 MEIOCA2RUB1 952 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 HSPB6O14558 160 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC22A1O15245 554 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 OR7C1O76099 320 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 MELTFP08582 738 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 UBBP0CG47 229 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 HTR2CP28335 458 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 GLIPR1P48060 266 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 AESQ08117 197 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 ATXN7L3Q14CW9 347 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 TAF9Q16594 264 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 C22orf42Q6IC83 251 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 C16orf87Q6PH81 154 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 LINC00596Q86U02 117 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 TMEM86BQ8N661 226 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
HERPUD1-210ENST00000565966 TRAV1-2A0A0B4J238 106 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 SLC17A2O00624 439 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 RBP4P02753 201 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 FBP1P09467 338 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 HKR1P10072 659 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 MGMTP16455 207 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 SAA4P35542 130 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 COMPP49747 757 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 KRBOX4Q5JUW0 171 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 SUMF2Q8NBJ7 301 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 OR6M1Q8NGM8 313 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 Q96M66 194 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 ING3Q9NXR8 418 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 V9GY05 133 aa11.28□□□□□ -0.6
HERPUD1-210ENST00000565966 ODAMA1E959 279 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 TRIM64CA6NLI5 447 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 MPIG6BO95866 241 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 PAHP00439 452 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 MYL9P24844 172 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 FGF9P31371 208 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 IER3P46695 156 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 KCNJ3P48549 501 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 P2RY14Q15391 338 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 MIDNQ504T8 468 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 ATAD3CQ5T2N8 411 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 OR10K2Q6IF99 312 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 PNKDQ8N490 385 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 CORO2AQ92828 525 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM46BQ96A09 425 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 CST11Q9H112 138 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 OR51E2Q9H255 320 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 KCNK15Q9H427 330 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 PLGRKTQ9HBL7 147 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
HERPUD1-210ENST00000565966 TRGV10A0A0A0MS01 117 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A10PA6NDY2 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A8PA6NJQ4 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A7PA6NKC0 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A22PA8MWA6 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 TMEM14DPA8MWL7 114 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A23PA8MXZ1 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 PDCD5O14737 125 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 BPNT1O95861 308 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 FAM90A24PP0C7X0 464 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
HERPUD1-210ENST00000565966 CD36P16671 472 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms