RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 DUX4L3P0CJ86 424 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4L4P0CJ87 422 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4L5P0CJ88 424 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4L6P0CJ89 424 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4L7P0CJ90 424 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 SELLP14151 372 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 ERP29P30040 261 aaKnown RBP6.47□□□□□ -1.37
CDH1-208ENST00000565810 PRSS3P35030 304 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 LMO4P61968 165 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 RPL31P62899 125 aaKnown RBP6.47□□□□□ -1.37
CDH1-208ENST00000565810 AESQ08117 197 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 LOXL1Q08397 574 aaPredicted RBP6.47□□□□□ -1.37
CDH1-208ENST00000565810 ATXN7L3Q14CW9 347 aaPredicted RBP6.47□□□□□ -1.37
CDH1-208ENST00000565810 ZNF260Q3ZCT1 412 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 PLAC9Q5JTB6 97 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 HACD4Q5VWC8 232 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 SLC35E4Q6ICL7 350 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4L9Q6RFH8 374 aaPredicted RBP6.47□□□□□ -1.37
CDH1-208ENST00000565810 ZNF841Q6ZN19 808 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 BIVMQ86UB2 503 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 SNX29P2Q8IUI4 249 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 ZNF565Q8N9K5 539 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 OR4M1Q8NGD0 313 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 S100ZQ8WXG8 99 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 SULT4A1Q9BR01 284 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 AUNIPQ9H7T9 357 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.47□□□□□ -1.37
CDH1-208ENST00000565810 OR6C3Q9NZP0 311 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 ZNF581Q9P0T4 197 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 CTSZQ9UBR2 303 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 DUX4Q9UBX2 424 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 LPAR3Q9UBY5 353 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 AK3Q9UIJ7 227 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 TRAPPC2LQ9UL33 140 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 MGAT4AQ9UM21 535 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 TACC2O95359 2948 aa6.47□□□□□ -1.37
CDH1-208ENST00000565810 MEIKINA0A087WXM9 373 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 TRGV10A0A0A0MS01 117 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 A0A1W2PQ09 198 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 ODAMA1E959 279 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 TMEM235A6NFC5 223 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 POM121CA8CG34 1229 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 SULT1C2O00338 296 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 PHF1O43189 567 aaPredicted RBP6.46□□□□□ -1.38
CDH1-208ENST00000565810 HLA-DQB1P01920 261 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 MT-ND4P03905 459 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 LIPFP07098 398 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 MELTFP08582 738 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 PTBP1P26599 531 aaKnown RBP eCLIP6.46□□□□□ -1.38
CDH1-208ENST00000565810 CBX5P45973 191 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 GZMKP49863 264 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 P2RX3P56373 397 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 MRPS10P82664 201 aaKnown RBP6.46□□□□□ -1.38
CDH1-208ENST00000565810 ZNF45Q02386 682 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 PAX5Q02548 391 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 MEF2CQ06413 473 aaPredicted RBP6.46□□□□□ -1.38
CDH1-208ENST00000565810 MADCAM1Q13477 382 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 PYDC2Q56P42 97 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 C6orf183Q5T699 404 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 RSBN1Q5VWQ0 802 aaPredicted RBP6.46□□□□□ -1.38
CDH1-208ENST00000565810 ZNF497Q6ZNH5 498 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 BTN2A1Q7KYR7 527 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 TRAPPC6BQ86SZ2 158 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 CCDC190Q86UF4 302 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 KRTAP1-3Q8IUG1 177 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 FAM185AQ8N0U4 392 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 WFDC11Q8NEX6 87 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 SETD6Q8TBK2 473 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 CCDC107Q8WV48 283 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 DCTN5Q9BTE1 182 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 NCOR1P1Q9H4R4 102 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 SCPEP1Q9HB40 452 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 RAB9BQ9NP90 201 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 C12orf4Q9NQ89 552 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 KCNIP1Q9NZI2 227 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 ARID1AO14497 2285 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.38
CDH1-208ENST00000565810 DYSFO75923 2080 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 ABCA12Q86UK0 2595 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 PPIAL4CA0A0B4J2A2 164 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 hCG_1809904A0A1W2PP81 198 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 A0A1W2PPE2 198 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 A0A1W2PR64 198 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 A0A1W2PRV1 198 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 A8MXK9 166 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 B4DSR2 109 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 CTDSPLO15194 276 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 ENSAO43768 121 aaKnown RBP6.45□□□□□ -1.38
CDH1-208ENST00000565810 PPIAL4GP0DN37 164 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 GZMHP20718 246 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 DTYMKP23919 212 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 ETV6P41212 452 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 GLP1RP43220 463 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 GLIPR1P48060 266 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 SEC61A1P61619 476 aaKnown RBP6.45□□□□□ -1.38
CDH1-208ENST00000565810 TRAT1Q6PIZ9 186 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 BTNL3Q6UXE8 466 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 MOB1BQ7L9L4 216 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 TPRX1Q8N7U7 411 aa6.45□□□□□ -1.38
CDH1-208ENST00000565810 LINC01356Q8N9X3 169 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms