RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 COQ2Q96H96 371 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 MGLLQ99685 303 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 YTHDF1Q9BYJ9 559 aaKnown RBP12.56□□□□□ -0.4
COMMD4-212ENST00000565517 BARHL1Q9BZE3 327 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 CHIAQ9BZP6 476 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 GAL3ST2Q9H3Q3 398 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 OR6C3Q9NZP0 311 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 SESN1Q9Y6P5 492 aa12.56□□□□□ -0.4
COMMD4-212ENST00000565517 MEX3AA1L020 520 aaKnown RBP12.55□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A8PA6NJQ4 464 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 IGHV4-59P01825 116 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 UCHL1P09936 223 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 CD37P11049 281 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 SRMP19623 302 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 AANATQ16613 207 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 ZNF626Q68DY1 528 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 OR52W1Q6IF63 320 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 GLIPR1L1Q6UWM5 242 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 HEPN1Q6WQI6 88 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 OR5R1Q8NH85 324 aa12.55□□□□□ -0.4
COMMD4-212ENST00000565517 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
COMMD4-212ENST00000565517 BTBD17A6NE02 478 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ZNF729A6NN14 1252 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ODF3BA8MYP8 253 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 GEMIN2O14893 280 aaKnown RBP12.54□□□□□ -0.4
COMMD4-212ENST00000565517 CLPXO76031 633 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 OR7C1O76099 320 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-212ENST00000565517 CRYBA1P05813 215 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 CGB3P0DN86 165 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 CGB7P0DN87 165 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 COX7A1P24310 79 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 MAP2K4P45985 399 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ATXN7L3Q14CW9 347 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-212ENST00000565517 HSD17B12Q53GQ0 312 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 AWAT1Q58HT5 328 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 GLT8D1Q68CQ7 371 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 AWAT2Q6E213 333 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ZNF367Q7RTV3 350 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 LRRTM1Q86UE6 522 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ZNF565Q8N9K5 539 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 SUMF2Q8NBJ7 301 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 OR4D6Q8NGJ1 314 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 TMEM133Q9H2Q1 129 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 SPACA1Q9HBV2 294 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 ACOT13Q9NPJ3 140 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 TNFRSF19Q9NS68 423 aa12.54□□□□□ -0.4
COMMD4-212ENST00000565517 A0A1W2PP11 408 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A10PA6NDY2 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A18PA6NE21 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A16PA6NEW6 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A20PA6NIJ5 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A7PA6NKC0 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A22PA8MWA6 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A12PA8MX19 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A5PA8MXJ8 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A23PA8MXZ1 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 ARG1P05089 322 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A15PP0C7V4 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A13PP0C7W8 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A14PP0C7W9 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 FAM90A24PP0C7X0 464 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 EMX1Q04741 257 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-212ENST00000565517 TAF9Q16594 264 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 C1orf100Q5SVJ3 147 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 RSBN1Q5VWQ0 802 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-212ENST00000565517 TMEM91Q6ZNR0 172 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 GDPGP1Q6ZNW5 385 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 TMEM203Q969S6 136 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 MALSU1Q96EH3 234 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 DPCDQ9BVM2 203 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-212ENST00000565517 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 PPIL3Q9H2H8 161 aaKnown RBP12.53□□□□□ -0.4
COMMD4-212ENST00000565517 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 DNHD1Q96M86 4753 aa12.53□□□□□ -0.4
COMMD4-212ENST00000565517 MEIKINA0A087WXM9 373 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 H3BUI4 141 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 HSPB6O14558 160 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 GPR137BO60478 399 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 MMP23AO75900 390 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 ARL6IP5O75915 188 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 UBBP0CG47 229 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 GABRA5P31644 462 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 RPS25P62851 125 aaKnown RBP12.52□□□□□ -0.41
COMMD4-212ENST00000565517 MINOS1Q5TGZ0 78 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 SLC35E4Q6ICL7 350 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 SVOPQ8N4V2 548 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 PLPPR1Q8TBJ4 325 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 SSX3Q99909 188 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 CLEC7AQ9BXN2 247 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 LINC00574Q9H8X3 128 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 ING3Q9NXR8 418 aa12.52□□□□□ -0.41
COMMD4-212ENST00000565517 KIF25Q9UIL4 384 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms