RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZNF485Q8NCK3 441 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 OR4M1Q8NGD0 313 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 NDNFQ8TB73 568 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 OR51E1Q8TCB6 317 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 THRSPQ92748 146 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 SDSLQ96GA7 329 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 RTL8AQ9BWD3 113 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 ISG20L2Q9H9L3 353 aaKnown RBP7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 GPR84Q9NQS5 396 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 FRRS1LQ9P0K9 344 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF319Q9P2F9 582 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 HHLA2Q9UM44 414 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 GTF2A1LQ9UNN4 478 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 V9GYS6 101 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 A0A1B0GTI1 187 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 TMEM210A6NLX4 147 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 OR4C45A6NMZ5 311 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 SYT7O43581 403 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 LY6G6CO95867 125 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 HCKP08631 526 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 IGHV1-8P0DP01 117 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 IRF3Q14653 427 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 SPHARQ15513 63 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 KCTD8Q6ZWB6 473 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 PRSS35Q8N3Z0 413 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 MS4A15Q8N5U1 240 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF676Q8N7Q3 588 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 OR5AK2Q8NH90 309 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF671Q8TAW3 534 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 RPL3LQ92901 407 aaKnown RBP7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 RNF166Q96A37 237 aaPredicted RBP7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 HIST1H2AAQ96QV6 131 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 TTTY10Q9BZA0 68 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 NEK6Q9HC98 313 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 CLEC2DQ9UHP7 191 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 ENPP5Q9UJA9 477 aa7.12□□□□□ -1.27
VPS9D1-205ENST00000565452 ALMS1Q8TCU4 4167 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 SH2D7A6NKC9 451 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 TNFAIP8O95379 198 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 RBP4P02753 201 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 AMY1AP04745 511 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 AMY2AP04746 511 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 CD2P06729 351 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF728P0DKX0 622 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 CD24P25063 80 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 HTR1DP28221 377 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 KIR3DL2P43630 455 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 MFGE8Q08431 387 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 CDK5R1Q15078 307 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 TRAM1Q15629 374 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 TBCEQ15813 527 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 GFOD2Q3B7J2 385 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 KCTD21Q4G0X4 260 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 FAM76BQ5HYJ3 339 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 OR2G6Q5TZ20 316 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 DMKNQ6E0U4 476 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 TEX38Q6PEX7 206 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF429Q86V71 674 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 COMMD2Q86X83 199 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF561Q8N587 486 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 OR5A2Q8NGI9 324 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 OR14K1Q8NGZ2 314 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 PP6455Q8WZ26 134 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 FCGR1BQ92637 280 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 SMIM19Q96E16 107 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 RNF170Q96K19 258 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 NR1H4Q96RI1 486 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 SPATA25Q9BR10 227 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 CCDC90BQ9GZT6 254 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 PAK1IP1Q9NWT1 392 aaPredicted RBP7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 RASL12Q9NYN1 266 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 RHBDD3Q9Y3P4 386 aa7.11□□□□□ -1.27
VPS9D1-205ENST00000565452 SERPINE3A8MV23 424 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 GATBO75879 557 aaKnown RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 NRASP01111 189 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 PRDX2P32119 198 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 NANOS3P60323 173 aaKnown RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 MLLT11Q13015 90 aaPredicted RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 TPBGQ13641 420 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF273Q14593 569 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 MED22Q15528 200 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 CEACAM21Q3KPI0 293 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 YIF1BQ5BJH7 314 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 CLVS2Q5SYC1 327 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 TMEM42Q69YG0 159 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 UTS2BQ765I0 119 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 SERPINA12Q8IW75 414 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 DRAM1Q8N682 238 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 OR5D14Q8NGL3 314 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 GPR148Q8TDV2 347 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 PIGCQ92535 297 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 NOL4LQ96MY1 436 aaPredicted RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 PAPOLGQ9BWT3 736 aaKnown RBP7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 PLEKHA1Q9HB21 404 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 DPM3Q9P2X0 92 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF222Q9UK12 451 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 PIGLQ9Y2B2 252 aa7.1□□□□□ -1.27
VPS9D1-205ENST00000565452 LSM2Q9Y333 95 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms