RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 A0A1W2PRV1 198 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 LRRC3CA6NJW4 275 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 ZNF587BE7ETH6 402 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 TK1P04183 234 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 MMP7P09237 267 aaPredicted RBP6.25□□□□□ -1.41
SMG1-210ENST00000565224 OR13C7P0DN81 318 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 CBR1P16152 277 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 ATP6V0CP27449 155 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 NPBWR2P48146 333 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 POLR2GP62487 172 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMG1-210ENST00000565224 TRA2AQ13595 282 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMG1-210ENST00000565224 TSC22D1Q15714 1073 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SRSF7Q16629 238 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMG1-210ENST00000565224 TRIM61Q5EBN2 209 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SPIN3Q5JUX0 258 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 WDR5BQ86VZ2 330 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SELENOHQ8IZQ5 122 aaKnown RBP6.25□□□□□ -1.41
SMG1-210ENST00000565224 BATF2Q8N1L9 274 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 ARL6IP6Q8N6S5 226 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 ZNF565Q8N9K5 539 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SUMF2Q8NBJ7 301 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SUMF1Q8NBK3 374 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 Q8NFD4 153 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 OR8G5Q8NG78 346 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 NANPQ8TBE9 248 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 MALSU1Q96EH3 234 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 PRDM14Q9GZV8 571 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 SLC25A31Q9H0C2 315 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 PLEKHF2Q9H8W4 249 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 LYRM2Q9NU23 88 aaPredicted RBP6.25□□□□□ -1.41
SMG1-210ENST00000565224 METTL1Q9UBP6 276 aaKnown RBP6.25□□□□□ -1.41
SMG1-210ENST00000565224 EML6Q6ZMW3 1958 aa6.25□□□□□ -1.41
SMG1-210ENST00000565224 A0A1W2PPE2 198 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 A0A1W2PPE3 182 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 BTBD17A6NE02 478 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZNF724A8MTY0 619 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 YKT6O15498 198 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ADAM20O43506 726 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 SSSCA1O60232 199 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 TRAPPC6AO75865 159 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 RFPL3SP0C7P2 107 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZNF806P0C7X5 589 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 CLDN15P56746 228 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 VAMP2P63027 116 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 SOHLH1Q5JUK2 328 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 WIPI1Q5MNZ9 446 aaPredicted RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 PMS2CLQ68D20 193 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 FAM24BQ8N5W8 94 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 CPEB3Q8NE35 698 aaKnown RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 Q9N2K0 584 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 RYDENQ9NUL5 291 aaKnown RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 PILRBQ9UKJ0 227 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 DUXBA0A1W2PPF3 345 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 NTN3O00634 580 aaPredicted RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 GPR37O15354 613 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 HSPA12AO43301 675 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 CYTIPO60759 359 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 NAPSAO96009 420 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 IGHEP01854 428 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ARG1P05089 322 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 BCL3P20749 454 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 OMGP23515 440 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZFP36L1Q07352 338 aaKnown RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 BAXQ07812 192 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 FABP9Q0Z7S8 132 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 FOXO1Q12778 655 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 NRN1LQ496H8 165 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 CDCP2Q5VXM1 449 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 RBMS3Q6XE24 437 aaKnown RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZNF818PQ6ZRF7 136 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 COLCA1Q6ZS62 124 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 SLC16A13Q7RTY0 426 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 GAPTQ8N292 157 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 TMEM252Q8N6L7 170 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZFP62Q8NB50 900 aaPredicted RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 OR56B2PQ8NGI1 322 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ABHD3Q8WU67 409 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 TMEM171Q8WVE6 324 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 CPNE4Q96A23 557 aaPredicted RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 SLAMF9Q96A28 289 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 TMEM45BQ96B21 275 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 RARRES2Q99969 163 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 ZNF251Q9BRH9 671 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 MAGT1Q9H0U3 335 aa6.24□□□□□ -1.41
SMG1-210ENST00000565224 UNKLQ9H9P5 680 aaKnown RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 SEBOXQ9HB31 216 aaPredicted RBP6.24□□□□□ -1.41
SMG1-210ENST00000565224 KIR2DS1A0A191URI9 304 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CLEC18AA5D8T8 446 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CDRT15L2A8MXV6 281 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 PROB1E7EW31 1015 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 TUSC2O75896 110 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 IGHV2-5P01817 119 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 CFIP05156 583 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 SCTP09683 121 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 MMP9P14780 707 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 VDAC1P21796 283 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 MAS1LP35410 378 aa6.23□□□□□ -1.41
SMG1-210ENST00000565224 KIR2DS4P43632 304 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms