RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 CDS2O95674 445 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 ZNF883P0CG24 379 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 SRPXP78539 464 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 CDCP2Q5VXM1 449 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 TBC1D26Q86UD7 250 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 ZDHHC23Q8IYP9 409 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 BOD1Q96IK1 185 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 RNF122Q9H9V4 155 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 CALHM2Q9HA72 323 aa13.07□□□□□ -0.32
HERC2-207ENST00000564734 SCTP09683 121 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 MIDNQ504T8 468 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 SELENOHQ8IZQ5 122 aaKnown RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 APOBEC3DQ96AK3 386 aaPredicted RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 SAV1Q9H4B6 383 aaPredicted RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 PARD6AQ9NPB6 346 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 TMEM9BQ9NQ34 198 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 FOXJ2Q9P0K8 574 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 MLXQ9UH92 298 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 ZNF724A8MTY0 619 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 CCNOP22674 350 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 MEX3BQ6ZN04 569 aaKnown RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 SECTM1Q8WVN6 248 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 AKR1E2Q96JD6 320 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 POM121L2Q96KW2 1035 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 TTTY12Q9BZ98 90 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 COLCA2A8K830 154 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 TSPAN15O95858 294 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 MAGEA5P43359 124 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 EWSR1Q01844 656 aaKnown RBP eCLIP13.06□□□□□ -0.32
HERC2-207ENST00000564734 MPV17LQ2QL34 196 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 ZNF818PQ6ZRF7 136 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 MRPL21Q7Z2W9 205 aaKnown RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
HERC2-207ENST00000564734 RXFP4Q8TDU9 374 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 LOXL4Q96JB6 756 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 B4GALT7Q9UBV7 327 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
HERC2-207ENST00000564734 CELSR3Q9NYQ7 3312 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 IGKV1-6A0A0C4DH72 117 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 SLC22A20A6NK97 555 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 ZNF732B4DXR9 585 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 NME2P1O60361 137 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 NGFP01138 241 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 FHITP49789 147 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 C19orf12Q9NSK7 152 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 LUZP4Q9P127 313 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 TNRC6AQ8NDV7 1962 aaKnown RBP13.05□□□□□ -0.32
HERC2-207ENST00000564734 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 SYNGR4O95473 234 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 PAX6P26367 422 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 RAB5CP51148 216 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 ABHD17BQ5VST6 288 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 OR5A2Q8NGI9 324 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 STRAPQ9Y3F4 350 aaKnown RBP13.05□□□□□ -0.32
HERC2-207ENST00000564734 ZNF175Q9Y473 711 aa13.05□□□□□ -0.32
HERC2-207ENST00000564734 CRYBA1P05813 215 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 RAB13P51153 203 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 OR1C1Q15619 314 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 MKXQ8IYA7 352 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 ZNF552Q9H707 407 aaPredicted RBP13.04□□□□□ -0.32
HERC2-207ENST00000564734 FAM166BA8MTA8 275 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 TK1P04183 234 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 ZNF806P0C7X5 589 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 GNMTQ14749 295 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 PEA15Q15121 130 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 HMGN3Q15651 99 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 TSC22D1Q15714 1073 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 GUK1Q16774 197 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 GAPTQ8N292 157 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 SHANK1Q9Y566 2161 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 DOCK10Q96BY6 2186 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 FAM24AA6NFZ4 105 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 K7N7A8 449 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 SYNGR1O43759 233 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 C1QL1O75973 258 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 JMJD7P0C870 316 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 ARR3P36575 388 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 RAB1AP62820 205 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 ODF3L1Q8IXM7 274 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 KDF1Q8NAX2 398 aaPredicted RBP13.04□□□□□ -0.32
HERC2-207ENST00000564734 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 GTF3AQ92664 365 aaKnown RBP13.04□□□□□ -0.32
HERC2-207ENST00000564734 GPR87Q9BY21 358 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 EGLN1Q9GZT9 426 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
HERC2-207ENST00000564734 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
HERC2-207ENST00000564734 UCP1P25874 307 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 CAMLGP49069 296 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 NMSQ5H8A3 153 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 ETV3LQ6ZN32 361 aa13.03□□□□□ -0.32
HERC2-207ENST00000564734 PLPPR1Q8TBJ4 325 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms