RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PRAMEF5Q5TYX0 476 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 ASCL4Q6XD76 172 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 CCDC121Q6ZUS5 278 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 OR5D18Q8NGL1 313 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 OR9G1Q8NH87 305 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 COQ2Q96H96 371 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 MMP28Q9H239 520 aa9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 ISG20L2Q9H9L3 353 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 AMMECR1Q9Y4X0 333 aaPredicted RBP9.75□□□□□ -0.85
GTF3C1-204ENST00000564664 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 CD2P06729 351 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 GZMHP20718 246 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 Q6ZS46 218 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 CNIH3Q8TBE1 160 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 GPR148Q8TDV2 347 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 RDH12Q96NR8 316 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 OR5M11Q96RB7 305 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 SLC25A33Q9BSK2 321 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 IFT22Q9H7X7 185 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF286AQ9HBT8 521 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 FGF20Q9NP95 211 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 NECAP2Q9NVZ3 263 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM118AQ9NWS6 357 aa9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A18PA6NE21 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A16PA6NEW6 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A20PA6NIJ5 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A9PA6NNJ1 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A12PA8MX19 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A5PA8MXJ8 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 NPIPB11E5RHQ5 1161 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 E9PI62 339 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 H0YJX3 145 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A15PP0C7V4 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A13PP0C7W8 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A14PP0C7W9 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 FAM90A24PP0C7X0 464 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 JUNBP17275 347 aaPredicted RBP9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 DCKP27707 260 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 RSU1Q15404 277 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 PAN3Q58A45 887 aaKnown RBP9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 NHLRC3Q5JS37 347 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 TMPRSS11AQ6ZMR5 421 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 RNF144BQ7Z419 303 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 LYG1Q8N1E2 194 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF555Q8NEP9 628 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 OR52I1Q8NGK6 324 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 TSEN15Q8WW01 171 aaKnown RBP9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 RPEQ96AT9 228 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 GPER1Q99527 375 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 SLC29A1Q99808 456 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 PDCD1LG2Q9BQ51 273 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 S100A14Q9HCY8 104 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 AMBNQ9NP70 447 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 PAK1IP1Q9NWT1 392 aaPredicted RBP9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 IL36GQ9NZH8 169 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 AASSQ9UDR5 926 aa9.73□□□□□ -0.85
GTF3C1-204ENST00000564664 MEIKINA0A087WXM9 373 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 TRAV24A0A0B4J272 114 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 TCRBV4S1A1TA0A5B7 111 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 J3QR06 171 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 DUS4LO95620 317 aaKnown RBP9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 CD33P20138 364 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 NFYBP25208 207 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 GDNFP39905 211 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 RAB7AP51149 207 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 LOXL3P58215 753 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 ATXN7L3Q14CW9 347 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 ABCA11PQ4W5N1 156 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 BAIAP2L2Q6UXY1 529 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 LINC00596Q86U02 117 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 SATL1Q86VE3 508 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 TNFAIP8L1Q8WVP5 186 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 KIRREL1Q96J84 757 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 NR1H4Q96RI1 486 aaPredicted RBP9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 METTL9Q9H1A3 318 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 TMEM138Q9NPI0 162 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 CALYQ9NYX4 217 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 IDI2-AS1Q9NZ38 188 aa9.72□□□□□ -0.85
GTF3C1-204ENST00000564664 GABRPO00591 440 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 OGG1O15527 345 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 CLIC3O95833 236 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 IL1AP01583 271 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 AMY1AP04745 511 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 AMY2AP04746 511 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 LPLP06858 475 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 LIMS3P0CW19 117 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 LIMS4P0CW20 117 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 PF4V1P10720 104 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 CD24P25063 80 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 OR3A4PP47883 348 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 PPP3R1P63098 170 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 MADCAM1Q13477 382 aa9.71□□□□□ -0.86
GTF3C1-204ENST00000564664 MED21Q13503 144 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms