RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 SUMO3P55854 103 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 UCP3P55916 312 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 BIDP55957 195 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 PIGPP57054 158 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF121P58317 390 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST1H2BDP58876 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPCS3P61009 180 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST1H2BCP62807 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 DLK1P80370 383 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 EWSR1Q01844 656 aaKnown RBP eCLIP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TLE3Q04726 772 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 GAMTQ14353 236 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 GNMTQ14749 295 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 KISS1Q15726 138 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SSX2Q16385 188 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST2H2BEQ16778 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TMEM176BQ3YBM2 270 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 KHDC3LQ587J8 217 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TMEM196Q5HYL7 178 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR2T2Q6IF00 324 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TCEAL6Q6IPX3 200 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 LCN10Q6JVE6 187 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPSB3Q6PJ21 355 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 CLEC9AQ6UXN8 241 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 DPPA3Q6W0C5 159 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPNS3Q6ZMD2 512 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 Q6ZSR6 202 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SLC16A14Q7RTX9 510 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 RNF144BQ7Z419 303 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF429Q86V71 674 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 C1orf87Q8N0U7 546 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 METTL27Q8N6F8 245 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF283Q8N7M2 679 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 C12orf76Q8N812 135 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HSD17B11Q8NBQ5 300 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SLC38A9Q8NBW4 561 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ADPRHL1Q8NDY3 354 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 PLPP5Q8NEB5 264 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 NOXO1Q8NFA2 376 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR10AD1Q8NGE0 317 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR10S1Q8NGN2 331 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR10G4Q8NGN3 311 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR2G3Q8NGZ4 309 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 OR14L1PQ8NHC6 308 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST1H2BHQ93079 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 DDIT4LQ96D03 193 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 RNF125Q96EQ8 232 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 BSCL2Q96G97 398 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 MARS2Q96GW9 593 aaKnown RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 FAM71F1Q96KD3 344 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 NOL4LQ96MY1 436 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPACA5Q96QH8 159 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TXN2Q99757 166 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPIN2AQ99865 258 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST1H2BNQ99877 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 HIST1H2BMQ99879 126 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SSX3Q99909 188 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SPIN2BQ9BPZ2 258 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 NIPSNAP3BQ9BS92 247 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 GPR61Q9BZJ8 451 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 PLA2G2FQ9BZM2 168 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 RTN4RQ9BZR6 473 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 WWTR1Q9GZV5 400 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SLC25A31Q9H0C2 315 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 SH3BGRL3Q9H299 93 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 LANCL2Q9NS86 450 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF701Q9NV72 531 aaPredicted RBP4.08□□□□□ -1.76
CAPN3-212ENST00000564503 COPS7AQ9UBW8 275 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 AK3Q9UIJ7 227 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ANXA10Q9UJ72 324 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 ZDHHC8Q9ULC8 765 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TP53TG5Q9Y2B4 290 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 POLR1DQ9Y2S0 133 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 MMP24Q9Y5R2 645 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 TNFRSF18Q9Y5U5 241 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 LHFPL6Q9Y693 200 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 V9GYS6 101 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 COL6A3P12111 3177 aa4.08□□□□□ -1.76
CAPN3-212ENST00000564503 IGKV1D-8A0A087WSZ0 117 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 IGKV3D-11A0A0A0MRZ8 115 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 LOC102723971A0A1B0GUV8 181 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 DUXBA0A1W2PPF3 345 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 SMCO3A2RU48 225 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 DHRS7CA6NNS2 312 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF850A8MQ14 1090 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 CDRT15L2A8MXV6 281 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 ZNF732B4DXR9 585 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 C9J4A7 227 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 C5orf67F2Z3F1 127 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 STMND1H3BQB6 276 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 CYB5BO43169 146 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 XRCC2O43543 280 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 RAMP1O60894 148 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 SMPD2O60906 423 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 KLF8O95600 359 aaPredicted RBP4.07□□□□□ -1.76
CAPN3-212ENST00000564503 CDS2O95674 445 aa4.07□□□□□ -1.76
CAPN3-212ENST00000564503 CYB5R3P00387 301 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms