RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 ZNF286AQ9HBT8 521 aa16.09■□□□□ 0.17
SHCBP1-203ENST00000564272 CNOT2Q9NZN8 540 aaKnown RBP16.09■□□□□ 0.17
SHCBP1-203ENST00000564272 PSORS1C1Q9UIG5 152 aa16.09■□□□□ 0.17
SHCBP1-203ENST00000564272 ING4Q9UNL4 249 aa16.09■□□□□ 0.17
SHCBP1-203ENST00000564272 F2RL2O00254 374 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 TSPAN15O95858 294 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 IGFBP3P17936 291 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 HTR1DP28221 377 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF93P35789 620 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 GLP1RP43220 463 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 HABP2Q14520 560 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 C17orf58Q2M2W7 97 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 Q499Y3 187 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 UTF1Q5T230 341 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 OR52W1Q6IF63 320 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 KLHDC1Q8N7A1 406 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 BPIFB6Q8NFQ5 453 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 OR2T6Q8NHC8 308 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF702PQ9H963 129 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 KIF25Q9UIL4 384 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 FOXJ3Q9UPW0 622 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 CMYA5Q8N3K9 4069 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 VWFP04275 2813 aa16.08■□□□□ 0.16
SHCBP1-203ENST00000564272 TRAV8-7A0A075B6U6 113 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF729A6NN14 1252 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 WIPF1O43516 503 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 C21orf33P30042 268 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 DYNLT3P51808 116 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 YIF1BQ5BJH7 314 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 RTN4RL2Q86UN3 420 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 STX19Q8N4C7 294 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 Q8NFD4 153 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 OR4D6Q8NGJ1 314 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 OR13A1Q8NGR1 328 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 PLPPR1Q8TBJ4 325 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 OR14A2Q96R54 314 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF184Q99676 751 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 METTL9Q9H1A3 318 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 VCXQ9H320 206 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 IL36GQ9NZH8 169 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 OR6C3Q9NZP0 311 aa16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 NKX1-2Q9UD57 310 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-203ENST00000564272 MEIKINA0A087WXM9 373 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 TRBV5-7A0A0A0MS05 114 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 A0A1W2PPK0 400 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 MYL12BO14950 172 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 SERPINA2P20848 420 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 CD34P28906 385 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 RBM11P57052 281 aaKnown RBP16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 BDH1Q02338 343 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 HERPUD1Q15011 391 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 RSBN1Q5VWQ0 802 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 ZNF596Q8TC21 504 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 TFAP2CQ92754 450 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 CDCA4Q9BXL8 241 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 MMP27Q9H306 513 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 PLCXD1Q9NUJ7 323 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 PITPNC1Q9UKF7 332 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 ST3GAL6Q9Y274 331 aa16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 TET2Q6N021 2002 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-203ENST00000564272 KBTBD11-OT1A0A1B0GTJ5 212 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 A0A1W2PP11 408 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 IGLV1-47P01700 117 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 CGB3P0DN86 165 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 CGB7P0DN87 165 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 VSIG10L2P0DP72 767 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 FSTP19883 344 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 NFYBP25208 207 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 TAS2R43P59537 309 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 C11orf88Q6PI97 169 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 OSR2Q8N2R0 312 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 C11orf44Q8N8P7 122 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 SUMF2Q8NBJ7 301 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 KIRREL1Q96J84 757 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 S100A13Q99584 98 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 DPCDQ9BVM2 203 aaPredicted RBP16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 FKBP14Q9NWM8 211 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 CALYQ9NYX4 217 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 DPM3Q9P2X0 92 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 CKLFQ9UBR5 152 aa16.05■□□□□ 0.16
SHCBP1-203ENST00000564272 TRAV39A0A0B4J263 110 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 GEMIN2O14893 280 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 KCNAB3O43448 404 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 GPX5O75715 221 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 OR7C1O76099 320 aaPredicted RBP16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 CSTBP04080 98 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 CD24P25063 80 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 WNT4P56705 351 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 RBM39Q14498 530 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 C2orf68Q2NKX9 166 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 HLA-DRB5Q30154 266 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 NHLRC3Q5JS37 347 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 Q6ZTK2 550 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 Q8N2B8 174 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 MRGPRDQ8TDS7 321 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 BARHL1Q9BZE3 327 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 DCLRE1BQ9H816 532 aa16.04■□□□□ 0.16
SHCBP1-203ENST00000564272 A0A087X0M5 115 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 A0A1B0GX30 115 aa16.03■□□□□ 0.16
SHCBP1-203ENST00000564272 FAM90A22PA8MWA6 464 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms