RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 ZNF275Q9NSD4 429 aaPredicted RBP3.74□□□□□ -1.81
SMG1-206ENST00000562668 TMEM100Q9NV29 134 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 BABAM2Q9NXR7 383 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 IL19Q9UHD0 177 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 ZNF391Q9UJN7 358 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 GNG8Q9UK08 70 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 EXOSC1Q9Y3B2 195 aaKnown RBP3.74□□□□□ -1.81
SMG1-206ENST00000562668 N6AMT1Q9Y5N5 214 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
SMG1-206ENST00000562668 NOTCH2Q04721 2471 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 CCDC168Q8NDH2 2452 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 FLNAP21333 2647 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 IGKV1-27A0A075B6S5 117 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 IGHV4-61A0A0C4DH41 118 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 TRBV5-5A0A0J9YX44 114 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZNF816-ZNF321PA0A0X1KG74 233 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 LOC107986453A0A1B0GWG9 222 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 GGT3PA6NGU5 568 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 A6NIN4 97 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 TRIM64CA6NLI5 447 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZNF850A8MQ14 1090 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 PTGES3LE9PB15 166 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 NDUFS8O00217 210 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 PIN1P1O15428 100 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 PLPP2O43688 288 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 FCN3O75636 299 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 SC5DO75845 299 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 FSTL3O95633 263 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 LHBP01229 141 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 IGHV2-70P01814 119 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 UBCP0CG48 685 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 ACHEP22303 614 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 CFL1P23528 166 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 IL2RGP31785 369 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 MAP2K4P45985 399 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 WNT4P56705 351 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 GABARAPL2P60520 117 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 LMO4P61968 165 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 TNFAIP6P98066 277 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 BDH1Q02338 343 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 EMX1Q04741 257 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 RIPPLY1Q0D2K3 151 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 MRPL28Q13084 256 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZNF154Q13106 437 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 PRDX4Q13162 271 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 UBE2V2Q15819 145 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ODF4Q2M2E3 257 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZNF181Q2M3W8 571 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 DMRTC1Q5HYR2 192 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 TMEM244Q5VVB8 128 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 RPL22L1Q6P5R6 122 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 PRSS48Q7RTY5 328 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 FAM220AQ7Z4H9 259 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 LYPD6Q86Y78 171 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 STX19Q8N4C7 294 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 GCSAMQ8N6F7 178 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZFP41Q8N8Y5 198 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 CCDC54Q8NEL0 328 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 OR13C5Q8NGS8 318 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZNF420Q8TAQ5 688 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 RDH5Q92781 318 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 SMIM19Q96E16 107 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ADAT3Q96EY9 351 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 FAM71F1Q96KD3 344 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 OPALINQ96PE5 141 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 NR1H4Q96RI1 486 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 PDCD1LG2Q9BQ51 273 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ADAT1Q9BUB4 502 aaKnown RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 SLC22A4Q9H015 551 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 OR51I2Q9H344 312 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 MYOZ1Q9NP98 299 aaPredicted RBP3.73□□□□□ -1.81
SMG1-206ENST00000562668 PIGLQ9Y2B2 252 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 TPRKBQ9Y3C4 175 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 MPC1Q9Y5U8 109 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 CUBNO60494 3623 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ARID1AO14497 2285 aa3.73□□□□□ -1.81
SMG1-206ENST00000562668 ZANQ9Y493 2812 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 A0A087X002 238 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 IGHV1-69-2A0A0G2JMI3 117 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TRBV2A0A0J9YWF9 115 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 IGHV3-64DA0A0J9YX35 117 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 PQLC2LA1A4F0 135 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 A6NLC8 198 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 TMEM212A6NML5 194 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ANKRD30BLA7E2S9 258 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 F5H0A9 414 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 H3BSH0 61 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 SYT7O43581 403 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 MRPS14O60783 128 aaKnown RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 GPX5O75715 221 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CYB5R3P00387 301 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 CSF3P09919 207 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CD37P11049 281 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 SLC25A16P16260 332 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 ZNF182P17025 639 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 IGFBP3P17936 291 aaPredicted RBP3.72□□□□□ -1.81
SMG1-206ENST00000562668 MYL12AP19105 171 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 MPZP25189 248 aa3.72□□□□□ -1.81
SMG1-206ENST00000562668 CFHR2P36980 270 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms