RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 OR13G1Q8NGZ3 307 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 OR4K15Q8NH41 348 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 TMEM171Q8WVE6 324 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 DYRK2Q92630 601 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 ZNF488Q96MN9 340 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 HIST1H2AAQ96QV6 131 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 MICU1Q9BPX6 476 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 NRIP2Q9BQI9 281 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 SLC25A21Q9BQT8 299 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-210ENST00000561817 ADAT1Q9BUB4 502 aaKnown RBP5.53□□□□□ -1.52
CAPN3-210ENST00000561817 TRAF4Q9BUZ4 470 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-210ENST00000561817 RTL8AQ9BWD3 113 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 BEX2Q9BXY8 128 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 RHOFQ9HBH0 211 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 BEX1Q9HBH7 125 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 HES4Q9HCC6 221 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 IFT46Q9NQC8 304 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 PCDHB16Q9NRJ7 776 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 SLC35D1Q9NTN3 355 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 PLEKHJ1Q9NW61 149 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 PPP1R14DQ9NXH3 145 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 ZNF230Q9UIE0 474 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-210ENST00000561817 OSGIN2Q9Y236 505 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 VSIG4Q9Y279 399 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 MEMO1Q9Y316 297 aa5.53□□□□□ -1.52
CAPN3-210ENST00000561817 PLCE1Q9P212 2302 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MEIKINA0A087WXM9 373 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TRBV6-6A0A0A6YYG2 114 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TRAV24A0A0B4J272 114 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TRGV8A0A0C4DH27 118 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 A0A1W2PRV1 198 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TMEM210A6NLX4 147 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 DISC1C4P0D8 188 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 EEF1E1-BLOC1S5C9J1V9 151 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 C16orf97H3BN30 126 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TRAPPC2LH3BP13 241 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 J3QKU1 62 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 M0R1B8 84 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 NAPSAO96009 420 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 IGHV3-13P01766 116 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 PMP2P02689 132 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 GLAP06280 429 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 FCGR3AP08637 254 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZBTB25P24278 435 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 GLRXP35754 106 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 EIF2B2P49770 351 aaKnown RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF81P51508 661 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SNU13P55769 128 aaKnown RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 RBPJQ06330 500 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MAB21L1Q13394 359 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ARFRP1Q13795 201 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 HABP2Q14520 560 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SRSF7Q16629 238 aaKnown RBP eCLIP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 NKPD1Q17RQ9 610 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 C2orf68Q2NKX9 166 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MPV17LQ2QL34 196 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF718Q3SXZ3 478 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 FBXL19-AS1Q494R0 122 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 AADACL3Q5VUY0 350 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TMEM211Q6ICI0 200 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF880Q6PDB4 577 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 UNQ6126/PRO20091Q6UXV3 157 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 PEG10Q86TG7 708 aaKnown RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 LINC00596Q86U02 117 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SLC25A42Q86VD7 318 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 LRP11Q86VZ4 500 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 BATF2Q8N1L9 274 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 GAPTQ8N292 157 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ARRDC1Q8N5I2 433 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SPICQ8N5J4 248 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZDHHC22Q8N966 263 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 ZBTB8BQ8NAP8 495 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 OR5AP2Q8NGF4 316 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 OR52B4Q8NGK2 314 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 CAPSLQ8WWF8 208 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MAFIPQ8WZ33 124 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 GTF3AQ92664 365 aaKnown RBP5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MUCL1Q96DR8 90 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SNX22Q96L94 193 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 PRRT1Q99946 306 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 MED28Q9H204 178 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 CXXC4Q9H2H0 198 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 LIME1Q9H400 295 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TMEM100Q9NV29 134 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 PIPOXQ9P0Z9 390 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 SCP2D1Q9UJQ7 156 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 FZR1Q9UM11 496 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 GPR132Q9UNW8 380 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 PLEKHA6Q9Y2H5 1048 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 POMT1Q9Y6A1 747 aa5.52□□□□□ -1.53
CAPN3-210ENST00000561817 TRAV34A0A0B4J273 112 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 hCG_1809904A0A1W2PP81 198 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 A0A1W2PPE2 198 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 A0A1W2PR64 198 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 UBE2QL1A1L167 161 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 DPRXA6NFQ7 191 aa5.51□□□□□ -1.53
CAPN3-210ENST00000561817 ZSCAN5BA6NJL1 495 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms