RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 RNASE10Q5GAN6 216 aaKnown RBP9.45□□□□□ -0.9
SNX1-212ENST00000560861 RSBN1Q5VWQ0 802 aaPredicted RBP9.45□□□□□ -0.9
SNX1-212ENST00000560861 ZNF497Q6ZNH5 498 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 C17orf107Q6ZR85 190 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 BTN2A1Q7KYR7 527 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 BPIFB2Q8N4F0 458 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 OR5AP2Q8NGF4 316 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 OR51S1Q8NGJ8 323 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 OR13C8Q8NGS7 320 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 OR4K15Q8NH41 348 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 HPS1Q92902 700 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 CREB3L1Q96BA8 519 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 SDSLQ96GA7 329 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 ST6GALNAC5Q9BVH7 336 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 RIMS4Q9H426 269 aaPredicted RBP9.45□□□□□ -0.9
SNX1-212ENST00000560861 SAP30LQ9HAJ7 183 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 TMEM165Q9HC07 324 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 ETAA1Q9NY74 926 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 COPZ2Q9P299 210 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 FBXO9Q9UK97 447 aaPredicted RBP9.45□□□□□ -0.9
SNX1-212ENST00000560861 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
SNX1-212ENST00000560861 UTP20O75691 2785 aaKnown RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 IGHV3OR15-7A0A075B7D8 119 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 LGALS8O00214 317 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 RP2O75695 350 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 PMP2P02689 132 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 CSN2P05814 226 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 PRDX2P32119 198 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 KCNJ3P48549 501 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 MECP2P51608 486 aaKnown RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 RAG2P55895 527 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 TAS2R46P59540 309 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 BTG1P62324 171 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 COL10A1Q03692 680 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 ATPAF1Q5TC12 328 aaPredicted RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 AGAP6Q5VW22 663 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 ZNF660Q6AZW8 331 aaPredicted RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 PLET1Q6UQ28 207 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 LHFPL1Q86WI0 220 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 ARRDC1Q8N5I2 433 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 BOLLQ8N9W6 283 aaKnown RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 OR5T2Q8NGG2 359 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 COQ2Q96H96 371 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 SHARPINQ9H0F6 387 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 PPA2Q9H2U2 334 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 ZNF701Q9NV72 531 aaPredicted RBP9.44□□□□□ -0.9
SNX1-212ENST00000560861 MAB21L2Q9Y586 359 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 USF3Q68DE3 2245 aa9.44□□□□□ -0.9
SNX1-212ENST00000560861 hCG_2014768A0A024R1R8 64 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 OOEPA6NGQ2 149 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 CEACAM18A8MTB9 384 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 DISC1C4P0D8 188 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 INMT-MINDY4F8WBC2 141 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 HSPB6O14558 160 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 FSTL3O95633 263 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 CLDN1O95832 211 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 AMY2AP04746 511 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
SNX1-212ENST00000560861 TLE4Q04727 773 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 CDK10Q15131 360 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 SLC35E4Q6ICL7 350 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
SNX1-212ENST00000560861 ZNF788Q6ZQV5 615 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 CADM3Q8N126 398 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 OR5H2Q8NGV7 314 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 CHAC2Q8WUX2 184 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 SNX22Q96L94 193 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 GAFA1Q96PS6 74 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 C20orf85Q9H1P6 137 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 LIME1Q9H400 295 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 ZNF286AQ9HBT8 521 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 DECR2Q9NUI1 292 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 MBNL3Q9NUK0 354 aaKnown RBP9.43□□□□□ -0.9
SNX1-212ENST00000560861 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 DNAJB11Q9UBS4 358 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 GLS2Q9UI32 602 aa9.43□□□□□ -0.9
SNX1-212ENST00000560861 IGKV1-6A0A0C4DH72 117 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 IGHV1-69-2A0A0G2JMI3 117 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 FUOMA2VDF0 154 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 C7orf66A4D0T2 115 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 LRRC30A6NM36 301 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 H7C1Q1 480 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 K7N7A8 449 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 FCN3O75636 299 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 GSTT2P0CG29 244 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 BCAP31P51572 246 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 MRPS11P82912 194 aaKnown RBP9.42□□□□□ -0.9
SNX1-212ENST00000560861 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
SNX1-212ENST00000560861 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
SNX1-212ENST00000560861 HERPUD1Q15011 391 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
SNX1-212ENST00000560861 HMGN3Q15651 99 aa9.42□□□□□ -0.9
SNX1-212ENST00000560861 GRK1Q15835 563 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms