RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PSMA1P25786 263 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 IER3P46695 156 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 GPR176Q14439 515 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 ATXN7L3Q14CW9 347 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 MIDNQ504T8 468 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 PAN3Q58A45 887 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 KRBOX4Q5JUW0 171 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 LDLRAD2Q5SZI1 272 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 UBE2UQ5VVX9 321 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 RSBN1Q5VWQ0 802 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 MRPS24Q96EL2 167 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 S100A13Q99584 98 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 TAS2R3Q9NYW6 316 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNRD1Q9P1U0 126 aa12.42□□□□□ -0.42
SNRPA1-213ENST00000560856 FAM90A8PA6NJQ4 464 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 ODF3BA8MYP8 253 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 HSPB6O14558 160 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 IGHV4-59P01825 116 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 COX7A1P24310 79 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 GABRA5P31644 462 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 GDNFP39905 211 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 KCNJ3P48549 501 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 COMPP49747 757 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 TAF9Q16594 264 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 C17orf58Q2M2W7 97 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 MPV17LQ2QL34 196 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 AWAT2Q6E213 333 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 C16orf87Q6PH81 154 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 CD200R1LQ6Q8B3 271 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 BAIAP2L2Q6UXY1 529 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 LINC00596Q86U02 117 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 SUMF2Q8NBJ7 301 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 OR11H6Q8NGC7 330 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 SSMEM1Q8WWF3 244 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 SLC25A28Q96A46 364 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 FOXRED1Q96CU9 486 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 CYYR1Q96J86 154 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 CHIAQ9BZP6 476 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 PCDHB16Q9NRJ7 776 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 RCC2Q9P258 522 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 KIF25Q9UIL4 384 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 POMT1Q9Y6A1 747 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 SESN1Q9Y6P5 492 aa12.41□□□□□ -0.42
SNRPA1-213ENST00000560856 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 OR7C1O76099 320 aaPredicted RBP12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 FBP1P09467 338 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 HKR1P10072 659 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 ZNF626Q68DY1 528 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 SIGIRRQ6IA17 410 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 HEPN1Q6WQI6 88 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 SVOPQ8N4V2 548 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 BEND2Q8NDZ0 799 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 TAF15Q92804 592 aaKnown RBP eCLIP12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 Q96M66 194 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 MEGF9Q9H1U4 602 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 BANF2Q9H503 90 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 LINC00574Q9H8X3 128 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 NDUFB11Q9NX14 153 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 ING3Q9NXR8 418 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 GHRLQ9UBU3 117 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 FAM96BQ9Y3D0 163 aa12.4□□□□□ -0.42
SNRPA1-213ENST00000560856 SHISA3A0PJX4 238 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 SLC22A1O15245 554 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 CLPXO76031 633 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 MGMTP16455 207 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 PAX6P26367 422 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 QRFPP83859 136 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 UTF1Q5T230 341 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 OR10K2Q6IF99 312 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 ZNF773Q6PK81 442 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 BRICD5Q6PL45 260 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 LHFPL4Q7Z7J7 247 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 DYNAPQ8N1N2 210 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 OR13A1Q8NGR1 328 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 OR13D1Q8NGV5 346 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 TMEM133Q9H2Q1 129 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 TNFRSF19Q9NS68 423 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 AK6Q9Y3D8 172 aaKnown RBP12.39□□□□□ -0.43
SNRPA1-213ENST00000560856 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A10PA6NDY2 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A18PA6NE21 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM181BA6NEQ2 426 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A16PA6NEW6 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A20PA6NIJ5 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A7PA6NKC0 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A22PA8MWA6 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A12PA8MX19 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A5PA8MXJ8 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A23PA8MXZ1 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A15PP0C7V4 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A13PP0C7W8 464 aa12.38□□□□□ -0.43
SNRPA1-213ENST00000560856 FAM90A14PP0C7W9 464 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms