RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 TNFAIP8L1Q8WVP5 186 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 CAPSLQ8WWF8 208 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 RGP1Q92546 391 aaPredicted RBP8.18□□□□□ -1.1
LDLR-214ENST00000560628 LEAP2Q969E1 77 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 FAM192AQ9GZU8 254 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 ZNF581Q9P0T4 197 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 KIF25Q9UIL4 384 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 ING4Q9UNL4 249 aa8.18□□□□□ -1.1
LDLR-214ENST00000560628 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 KBTBD11-OT1A0A1B0GTJ5 212 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ZNF729A6NN14 1252 aaPredicted RBP8.17□□□□□ -1.1
LDLR-214ENST00000560628 LY6LH3BQJ8 138 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 GABRPO00591 440 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 WBP4O75554 376 aaKnown RBP8.17□□□□□ -1.1
LDLR-214ENST00000560628 CDRT1O95170 752 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 HTR3BO95264 441 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 CLIC3O95833 236 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 CSN2P05814 226 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 LPLP06858 475 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 CGB3P0DN86 165 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 CGB7P0DN87 165 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 GLP1RP43220 463 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 MRPL28Q13084 256 aaKnown RBP8.17□□□□□ -1.1
LDLR-214ENST00000560628 RSU1Q15404 277 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 PIGYQ3MUY2 71 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ABCA11PQ4W5N1 156 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 C9orf152Q5JTZ5 239 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 OR2G6Q5TZ20 316 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ELP2Q6IA86 826 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ZNF529Q6P280 563 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ZNF565Q8N9K5 539 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ZNF555Q8NEP9 628 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 PXT1Q8NFP0 134 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 OR51T1Q8NGJ9 327 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 OR13A1Q8NGR1 328 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 CNIH3Q8TBE1 160 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 GPR148Q8TDV2 347 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 ORAI1Q96D31 301 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 SLC25A33Q9BSK2 321 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 JAM3Q9BX67 310 aa8.17□□□□□ -1.1
LDLR-214ENST00000560628 FGF20Q9NP95 211 aaPredicted RBP8.17□□□□□ -1.1
LDLR-214ENST00000560628 SIRT4Q9Y6E7 314 aaPredicted RBP8.17□□□□□ -1.1
LDLR-214ENST00000560628 EBAG9O00559 213 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 PLXNB1O43157 2135 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 ALDOBP05062 364 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
LDLR-214ENST00000560628 CEACAM3P40198 252 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 ARHGDIBP52566 201 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 CD83Q01151 205 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 LRRC36Q1X8D7 754 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 TCTEX1D4Q5JR98 221 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 RPL22L1Q6P5R6 122 aaKnown RBP8.16□□□□□ -1.1
LDLR-214ENST00000560628 TMPRSS11AQ6ZMR5 421 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 C16orf82Q7Z2V1 217 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 OR4F17Q8NGA8 305 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 OR13C5Q8NGS8 318 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 OR9G1Q8NH87 305 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 PLPPR1Q8TBJ4 325 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 MRGPRDQ8TDS7 321 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 CREB3L1Q96BA8 519 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 KIRREL1Q96J84 757 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 AKR1E2Q96JD6 320 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 RBM14Q96PK6 669 aaKnown RBP8.16□□□□□ -1.1
LDLR-214ENST00000560628 OR4F4Q96R69 305 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 BARHL1Q9BZE3 327 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 LIN7BQ9HAP6 207 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 CALYQ9NYX4 217 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 CLEC2DQ9UHP7 191 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 NOTCH3Q9UM47 2321 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 TGP01266 2768 aa8.16□□□□□ -1.1
LDLR-214ENST00000560628 A0A087X0M5 115 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 A0A1B0GX30 115 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 TCRBV4S1A1TA0A5B7 111 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 J3QR06 171 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 OGG1O15527 345 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 XPNPEP2O43895 674 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 OR2F2O95006 317 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 AMY1AP04745 511 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 AMY2AP04746 511 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 CD2P06729 351 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 DCKP27707 260 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 MNDAP41218 407 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 GNG10P50151 68 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 DIAPH2-AS1Q14236 149 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 IL13RA2Q14627 380 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 CCDC58Q4VC31 144 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 KPRPQ5T749 579 aaPredicted RBP8.15□□□□□ -1.1
LDLR-214ENST00000560628 RSBN1Q5VWQ0 802 aaPredicted RBP8.15□□□□□ -1.1
LDLR-214ENST00000560628 C10orf99Q6UWK7 81 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 ASCL4Q6XD76 172 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 SUMF2Q8NBJ7 301 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 HAVCR2Q8TDQ0 301 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 CYGBQ8WWM9 190 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 SGCDQ92629 289 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 TMEM106AQ96A25 262 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 RPEQ96AT9 228 aa8.15□□□□□ -1.1
LDLR-214ENST00000560628 CPNE2Q96FN4 548 aaPredicted RBP8.15□□□□□ -1.1
LDLR-214ENST00000560628 DPCDQ9BVM2 203 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms