RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 H1FOOQ8IZA3 346 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 OR2C3Q8N628 320 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF383Q8NA42 475 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 NOXO1Q8NFA2 376 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 OR2G3Q8NGZ4 309 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 OR6X1Q8NH79 312 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 FAM213BQ8TBF2 198 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 RTN4IP1Q8WWV3 396 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 C11orf40Q8WZ69 217 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 HAS2Q92819 552 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 SPTSSAQ969W0 71 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 CMBLQ96DG6 245 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ADAT3Q96EY9 351 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 IP6K3Q96PC2 410 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 GAL3ST4Q96RP7 486 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF701Q9NV72 531 aaPredicted RBP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 DOK5Q9P104 306 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 TP53TG5Q9Y2B4 290 aa7.45□□□□□ -1.22
CCDC33-209ENST00000560565 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
CCDC33-209ENST00000560565 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 IGHV1-45A0A0A0MS14 117 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A10PA6NDY2 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A18PA6NE21 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A16PA6NEW6 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A20PA6NIJ5 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A8PA6NJQ4 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A7PA6NKC0 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF726A6NNF4 738 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF850A8MQ14 1090 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FOXI3A8MTJ6 420 aaPredicted RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A22PA8MWA6 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A12PA8MX19 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A5PA8MXJ8 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A23PA8MXZ1 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 H3BSH0 61 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 SOCS1O15524 211 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 SOX15O60248 233 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 RAD51DO75771 328 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 CYB5R3P00387 301 aaPredicted RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 UMODP07911 640 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A15PP0C7V4 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A13PP0C7W8 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A14PP0C7W9 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM90A24PP0C7X0 464 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 GLRA1P23415 457 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 GPX4P36969 197 aaPredicted RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PIGPP57054 158 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 RND3P61587 244 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 POU3F1Q03052 451 aaPredicted RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 IL24Q13007 206 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PCOLCEQ15113 449 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 KISS1Q15726 138 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 ACOT6Q3I5F7 207 aaPredicted RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 SLC22A6Q4U2R8 563 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 C1QL3Q5VWW1 255 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 POMZP3Q6PJE2 187 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 SHISA6Q6ZSJ9 500 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 Q6ZSR3 168 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 GALNTL5Q7Z4T8 443 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 MARCH3Q86UD3 253 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FOXRED2Q8IWF2 684 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 OR5AS1Q8N127 324 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF283Q8N7M2 679 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 ZNF321PQ8N8H1 164 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 HSD17B11Q8NBQ5 300 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 GJC3Q8NFK1 279 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 OR51E1Q8TCB6 317 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PINX1Q96BK5 328 aaKnown RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PGAM5Q96HS1 289 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 RCC1LQ96I51 464 aaKnown RBP7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FAM210BQ96KR6 192 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 IMMP1LQ96LU5 166 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 YPEL4Q96NS1 127 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PIGQQ9BRB3 760 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 DEFB126Q9BYW3 111 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 PTGES2Q9H7Z7 377 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 FBXO7Q9Y3I1 522 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 HS3ST3B1Q9Y662 390 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 WSB1Q9Y6I7 421 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 V9GYS6 101 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 DOPEY2Q9Y3R5 2298 aa7.44□□□□□ -1.22
CCDC33-209ENST00000560565 A0A087X0M5 115 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 TRBV11-1A0A0K0K1C0 115 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 A0A1B0GX30 115 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 A0A1W2PPE2 198 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 LINC01387J3KSC0 135 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 MSTNO14793 375 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 VAMP5O95183 116 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 HPNP05981 417 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 COX6A1P12074 109 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 SLC25A6P12236 298 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 SERPINA2P20848 420 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 PTGER4P35408 488 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 NKX2-1P43699 371 aaPredicted RBP7.43□□□□□ -1.22
CCDC33-209ENST00000560565 RND2P52198 227 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 TMEM50BP56557 158 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 TAS2R30P59541 319 aa7.43□□□□□ -1.22
CCDC33-209ENST00000560565 EWSR1Q01844 656 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms