RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZBTB37Q5TC79 503 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 GPR27Q9NS67 375 aa11.85□□□□□ -0.51
TRAF3-208ENST00000560371 RNF224P0DH78 156 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 NCR3LG1Q68D85 454 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 PCGF1Q9BSM1 259 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 CA10Q9NS85 328 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 NEU3Q9UQ49 428 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 FUCA1P04066 466 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 PTHLHP12272 177 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 IGHA2P01877 340 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 OR5AC1P0C628 307 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 TCTE3Q8IZS6 198 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 SAP25Q8TEE9 199 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 S100A8P05109 93 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 TMEM251Q8N6I4 163 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 OR8D4Q8NGM9 314 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 TMEM231Q9H6L2 316 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 FAM3AP98173 230 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 TIAL1Q01085 375 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 HLXQ14774 488 aaPredicted RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 MDP1Q86V88 176 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 ZNF629Q9UEG4 869 aaPredicted RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 ORM2P19652 201 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 FOXL2P58012 376 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 PDZK1IP1Q13113 114 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 OR5A2Q8NGI9 324 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 OR2J1Q9GZK6 312 aa11.84□□□□□ -0.51
TRAF3-208ENST00000560371 GAR1Q9NY12 217 aaKnown RBP11.84□□□□□ -0.51
TRAF3-208ENST00000560371 PLPPR5Q32ZL2 321 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 CBY3A6NI87 242 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 P2RY6Q15077 328 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 TGIF2LYQ8IUE0 185 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 TGIF2LXQ8IUE1 241 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 WDR61Q9GZS3 305 aaKnown RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 C11orf87Q6NUJ2 197 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SLC23A3Q6PIS1 610 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 NAA60Q9H7X0 242 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SEMA7AO75326 666 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 IGHA1P01876 353 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SLC38A11Q08AI6 406 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 CDC20Q12834 499 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 FAM162BQ5T6X4 162 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 GEMIN2O14893 280 aaKnown RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 GNG7O60262 68 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 DHRS2Q13268 280 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 CTF1Q16619 201 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 Q6ZNX1 250 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 FRRS1LQ9P0K9 344 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 IGHV1-45A0A0A0MS14 117 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 GATCO43716 136 aaKnown RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
TRAF3-208ENST00000560371 FAM214BQ7L5A3 538 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 RAB18Q9NP72 206 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 POMT1Q9Y6A1 747 aa11.83□□□□□ -0.52
TRAF3-208ENST00000560371 SOX15O60248 233 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 FABP9Q0Z7S8 132 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 OXA1LQ15070 435 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 DHRS7BQ6IAN0 325 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 PRR33A8MZF0 331 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 CCL8P80075 99 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 TSPO2Q5TGU0 170 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 OR5C1Q8NGR4 320 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 ZMIZ1Q9ULJ6 1067 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 IGKV3-7A0A075B6H7 116 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 LOC102723971A0A1B0GUV8 181 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 CELA2AP08217 269 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 RAB33BQ9H082 229 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 NDUFB6O95139 128 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 BCL3P20749 454 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 SLC16A12Q6ZSM3 486 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 OR5M8Q8NGP6 311 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 KIAA0141Q14154 515 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 ZNF528Q3MIS6 628 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 RELL2Q8NC24 303 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 TMEM52Q8NDY8 209 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 DOK5Q9P104 306 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 GPR6P46095 362 aaPredicted RBP11.82□□□□□ -0.52
TRAF3-208ENST00000560371 GAMTQ14353 236 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 CLEC12BQ2HXU8 276 aa11.82□□□□□ -0.52
TRAF3-208ENST00000560371 SIGLECL1Q8N7X8 197 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms