RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SLC25A34Q6PIV7 304 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 Q6ZSR9 355 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR5A1Q8NGJ0 315 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 PDXPQ96GD0 296 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 RNF186Q9NXI6 227 aa12.31□□□□□ -0.44
CSPG4P12-202ENST00000559989 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 TEPPQ6URK8 271 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 DLEU7Q6UYE1 221 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 VN1R2Q8NFZ6 395 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 ALG1L2C9J202 215 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 WNT9BO14905 357 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 MT-ND6P03923 174 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 PRDX2P32119 198 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 TM4SF20Q53R12 229 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 PEF1Q9UBV8 284 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 STARD10Q9Y365 291 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 RTP5Q14D33 572 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 DNAJC25-GNG10A0A024R161 153 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 PPM1DO15297 605 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 RECKO95980 971 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 MT-CO3P00414 261 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 C10orf128Q5T292 105 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC37A2Q8TED4 501 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 PAXXQ9BUH6 204 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 F11RQ9Y624 299 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 A0A1W2PR48 441 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 LEUTXA8MZ59 168 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC35B1P78383 322 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 BAHD1Q8TBE0 780 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 GPR35Q9HC97 309 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 MROH1Q8NDA8 1641 aa12.3□□□□□ -0.44
CSPG4P12-202ENST00000559989 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 OLIG3Q7RTU3 272 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 MTFP1Q9UDX5 166 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMSB15BA0A087X1C1 80 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 NDUFS8O00217 210 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC25A20O43772 301 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 AMY1AP04745 511 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 NAT2P11245 290 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 FAHD1Q6P587 224 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 RND1Q92730 232 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 GALNT14Q96FL9 552 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 IGHV3-43A0A0B4J1X8 118 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 A0A1W2PQM1 296 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 NPFFO15130 113 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 IGHV3-43DP0DP04 118 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 RPS20P60866 119 aaKnown RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRAF4Q9BUZ4 470 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 PAGE4O60829 102 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 TNFSF15O95150 251 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZGLP1P0C6A0 271 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZG16BQ96DA0 208 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 TEX37Q96LM6 180 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 METTL26Q96S19 204 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 SLC25A1P53007 311 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 NFAM1Q8NET5 270 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR10AC1Q8NH08 325 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 MRGPRDQ8TDS7 321 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF296Q8WUU4 475 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 HLA-DRB1P01911 266 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 OR10AG1Q8NH19 301 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 SSMEM1Q8WWF3 244 aa12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 NUDT16L1Q9BRJ7 211 aaKnown RBP12.29□□□□□ -0.44
CSPG4P12-202ENST00000559989 PDCD6O75340 191 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 LEPROTL1O95214 131 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 WNT1P04628 370 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 FAM109BQ6ICB4 259 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 URB1O60287 2271 aaKnown RBP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 LAMA4Q16363 1823 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF142P52746 1687 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 WSB2Q9NYS7 404 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 ADAMTS5Q9UNA0 930 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 A0A087WUJ7 227 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 CTAG2O75638 210 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 MDP1Q86V88 176 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 NUDT8Q8WV74 236 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 SMDT1Q9H4I9 107 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 INSIG2Q9Y5U4 225 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 TRAV39A0A0B4J263 110 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 CHST1O43916 411 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 CCR5P51681 352 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 POLR2GP62487 172 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 DDB2Q92466 427 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 ABHD14BQ96IU4 210 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 RGPD1P0DJD0 1748 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 A0A1W2PS18 150 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 TYMSP04818 313 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 B4GALNT1Q00973 533 aa12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 ZNF324BQ6AW86 544 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-202ENST00000559989 C16orf52Q8NHV5 167 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms