RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 A0A0U1RQV5 110 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 A0A1B0GTI1 187 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 PQLC2LA1A4F0 135 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 A6NDX4 124 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 CCDC182A6NF36 153 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 C17orf98A8MV24 154 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ODF3BA8MYP8 253 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 F8VVB4 439 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 F8VWA3 439 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 NOS1APO75052 506 aaPredicted RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 GPX5O75715 221 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 TTRP02766 147 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 PGA5P0DJD9 388 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 VSIG10L2P0DP72 767 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 FAHP16930 419 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 PAICSP22234 425 aaKnown RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 PRDX2P32119 198 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ERVK11-1P61568 191 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 BLCAPP62952 87 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ACTC1P68032 377 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ACTA1P68133 377 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ROM1Q03395 351 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 TCTEX1D4Q5JR98 221 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 DDI2Q5TDH0 399 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 TMEM42Q69YG0 159 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 C11orf88Q6PI97 169 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 HAGHLQ6PII5 290 aaPredicted RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 Q6ZSR3 168 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 LYSMD2Q8IV50 215 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 FAM185AQ8N0U4 392 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 FTMTQ8N4E7 242 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 PARP16Q8N5Y8 322 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ACBD7Q8N6N7 88 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 GDPD1Q8N9F7 314 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 POC1AQ8NBT0 407 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ZNF485Q8NCK3 441 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR4M1Q8NGD0 313 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR5A2Q8NGI9 324 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR51G2Q8NGK0 314 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR5D13Q8NGL4 314 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR4C13Q8NGP0 309 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR51E1Q8TCB6 317 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ACOT12Q8WYK0 555 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 PHF21AQ96BD5 680 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 MRPL48Q96GC5 212 aaKnown RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 FAM210AQ96ND0 272 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 OR8B4Q96RC9 309 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 CITED2Q99967 270 aaPredicted RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 NRIP2Q9BQI9 281 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 NIPAL2Q9H841 368 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 ABCB9Q9NP78 766 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 GPR84Q9NQS5 396 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 AURKAIP1Q9NWT8 199 aaPredicted RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 RASL12Q9NYN1 266 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 RABL2AQ9UBK7 228 aaPredicted RBP4.66□□□□□ -1.66
USP3-215ENST00000559771 RABL2BQ9UNT1 228 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 TCF19Q9Y242 345 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 NOTCH3Q9UM47 2321 aa4.66□□□□□ -1.66
USP3-215ENST00000559771 hCG_2014768A0A024R1R8 64 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 TMEM269A0A1B0GVZ9 245 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 MEX3AA1L020 520 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 OR5B21A6NL26 309 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PRR23D1E9PI22 279 aaPredicted RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 J3QRE1 110 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 RGS13O14921 159 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PIN1P1O15428 100 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 MAGEB4O15481 346 aaPredicted RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 ZNF737O75373 536 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 TK1P04183 234 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 CD1AP06126 327 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PRR23D2P0DMB1 279 aaPredicted RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 COX7A1P24310 79 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 MPZP25189 248 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 TNFSF8P32971 234 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 SDC2P34741 201 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 RPS19P39019 145 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 ETV1P50549 477 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 SCN1BQ07699 218 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 NSUN5P1Q3KNT7 163 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 TMEM95Q3KNT9 176 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PLA1AQ53H76 456 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 SLC35D3Q5M8T2 416 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 MZT2AQ6P582 158 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 ZNF782Q6ZMW2 699 aaPredicted RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 MOB3CQ70IA8 216 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 MEPCEQ7L2J0 689 aaKnown RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 TPRA1Q86W33 373 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 TMEM219Q86XT9 240 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 CALHM1Q8IU99 346 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.65□□□□□ -1.67
USP3-215ENST00000559771 ZNF561Q8N587 486 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 WFDC9Q8NEX5 89 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 OR11H6Q8NGC7 330 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 OR2T6Q8NHC8 308 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 ZNF671Q8TAW3 534 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 PHYHIPQ92561 330 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 OTULINQ96BN8 352 aa4.65□□□□□ -1.67
USP3-215ENST00000559771 NEURL2Q9BR09 285 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms