RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 GATBO75879 557 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RPP14O95059 124 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SIX6O95475 246 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF682O95780 498 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 AIFM1O95831 613 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 CD74P04233 296 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 CD2P06729 351 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 GUSBP08236 651 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ANXA5P08758 320 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ANXA4P09525 319 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 BCKDHAP12694 445 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NQO2P16083 231 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 HLA-GP17693 338 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 PRPS1L1P21108 318 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 FGF7P21781 194 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 HTR2CP28335 458 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 S100A2P29034 98 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 AQP1P29972 269 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 S100A3P33764 101 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OMPP47874 163 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 IDH2P48735 452 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 PPT1P50897 306 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RAB8AP61006 207 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 LSM6P62312 80 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RPS25P62851 125 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SELENOWP63302 87 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 BEX3Q00994 111 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 FABP5Q01469 135 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ACVR1Q04771 509 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 MXD1Q05195 221 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 PJVKQ0ZLH3 352 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR4D1Q15615 310 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR8G1Q15617 311 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NDUFAF6Q330K2 333 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ACSF3Q4G176 576 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 MESTQ5EB52 335 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ARMC12Q5T9G4 340 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SLC25A24Q6NUK1 477 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 LPCAT3Q6P1A2 487 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RPS27LQ71UM5 84 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ARMCX2Q7L311 632 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SLC16A14Q7RTX9 510 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SLC36A1Q7Z2H8 476 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 C6orf120Q7Z4R8 191 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SERPINA9Q86WD7 417 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ZBTB8OSQ8IWT0 167 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SLC30A8Q8IWU4 369 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 GCNT2Q8N0V5 402 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ZFP82Q8N141 532 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 BPIFB2Q8N4F0 458 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 LINC00471Q8N535 108 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 COMMD1Q8N668 190 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF283Q8N7M2 679 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 FADS6Q8N9I5 356 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SLC30A7Q8NEW0 376 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR5T1Q8NG75 326 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR4F15Q8NGB8 312 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR11G2Q8NGC1 345 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR10A7Q8NGE5 316 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR52I1Q8NGK6 324 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR5M1Q8NGP8 315 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR1S2Q8NGQ3 325 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR13C8Q8NGS7 320 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR13D1Q8NGV5 346 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TERB2Q8NHR7 220 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 PIGXQ8TBF5 258 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TRMT10AQ8TBZ6 339 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 M1APQ8TC57 530 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RNASEH2CQ8TDP1 164 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 THEM6Q8WUY1 208 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SMIM4Q8WVI0 70 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 FGF11Q92914 225 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 HPDLQ96IR7 371 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SMIM8Q96KF7 97 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 OR52E6Q96RD3 313 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TRIB3Q96RU7 358 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NIPSNAP1Q9BPW8 284 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NRIP2Q9BQI9 281 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF426Q9BUY5 554 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TSSK6Q9BXA6 273 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 DUSP16Q9BY84 665 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 ACTR3CQ9C0K3 210 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 MFFQ9GZY8 342 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TLNRD1Q9H1K6 362 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SYT4Q9H2B2 425 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 RHBGQ9H310 441 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 METTL8Q9H825 291 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NMNAT1Q9HAN9 279 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 TMEM27Q9HBJ8 222 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 NOX3Q9HBY0 568 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 HRASLSQ9HDD0 168 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SIRT7Q9NRC8 400 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 UBQLN4Q9NRR5 601 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 GPATCH2LQ9NWQ4 482 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 CLEC2DQ9UHP7 191 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 PCYT1BQ9Y5K3 369 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 KPTNQ9Y664 436 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 DICER1Q9UPY3 1922 aaKnown RBP2.12□□□□□ -2.07
VPS13C-208ENST00000559119 COL18A1P39060 1754 aa2.12□□□□□ -2.07
VPS13C-208ENST00000559119 SBF2Q86WG5 1849 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms