RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 LALBAP00709 142 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 CDK1P06493 297 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 IGFBP3P17936 291 aaPredicted RBP12.34□□□□□ -0.43
RPL28-206ENST00000558752 OR3A1P47881 315 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 KCNJ3P48549 501 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 DLX1P56177 255 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 SCN1BQ07699 218 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 RIPK1Q13546 671 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 GPR50Q13585 617 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 NSUN5P1Q3KNT7 163 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 RNF144BQ7Z419 303 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 MS4A15Q8N5U1 240 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 ZNF565Q8N9K5 539 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 OR51A2Q8NGJ7 313 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
RPL28-206ENST00000558752 PGLYRP3Q96LB9 341 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 BARHL1Q9BZE3 327 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 CHST6Q9GZX3 395 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 GAL3ST2Q9H3Q3 398 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPL28-206ENST00000558752 ABCB10Q9NRK6 738 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 PITPNC1Q9UKF7 332 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 TPRKBQ9Y3C4 175 aa12.34□□□□□ -0.43
RPL28-206ENST00000558752 MEGF11A6BM72 1044 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 PTGES3LE9PB15 166 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 H0YHG0 523 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 SIRPB1O00241 398 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 GABRPO00591 440 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
RPL28-206ENST00000558752 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
RPL28-206ENST00000558752 CALCBP10092 127 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 CELP19835 753 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 MAPK3P27361 379 aaPredicted RBP12.33□□□□□ -0.44
RPL28-206ENST00000558752 HSPA13P48723 471 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 RPS11P62280 158 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPL28-206ENST00000558752 NHLRC3Q5JS37 347 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 DDI2Q5TDH0 399 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 MINOS1Q5TGZ0 78 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 ZNF626Q68DY1 528 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 LINC00596Q86U02 117 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 RTN4RL2Q86UN3 420 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 MRPS24Q96EL2 167 aaKnown RBP12.33□□□□□ -0.44
RPL28-206ENST00000558752 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
RPL28-206ENST00000558752 MND1Q9BWT6 205 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 SESN1Q9Y6P5 492 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 MINOS1-NBL1R4GNA1 71 aa12.33□□□□□ -0.44
RPL28-206ENST00000558752 TRBV5-7A0A0A0MS05 114 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 VGLL3A8MV65 326 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
RPL28-206ENST00000558752 FSTP19883 344 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 MYF6P23409 242 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 COX7A1P24310 79 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 SNU13P55769 128 aaKnown RBP12.32□□□□□ -0.44
RPL28-206ENST00000558752 PAX5Q02548 391 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 DOC2BQ14184 412 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 ARSJQ5FYB0 599 aaPredicted RBP12.32□□□□□ -0.44
RPL28-206ENST00000558752 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 HEPN1Q6WQI6 88 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 TRAPPC6BQ86SZ2 158 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 AJUBAQ96IF1 538 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 PRSS22Q9GZN4 317 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 TMEM133Q9H2Q1 129 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
RPL28-206ENST00000558752 ODAMA1E959 279 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 ODF3BA8MYP8 253 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 HTR3BO95264 441 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 ARG1P05089 322 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 AQP4P55087 323 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 AESQ08117 197 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 OXLD1Q5BKU9 147 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 ZNF782Q6ZMW2 699 aaPredicted RBP12.31□□□□□ -0.44
RPL28-206ENST00000558752 OSR2Q8N2R0 312 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 C17orf50Q8WW18 174 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 CREB3L1Q96BA8 519 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 NR1H4Q96RI1 486 aaPredicted RBP12.31□□□□□ -0.44
RPL28-206ENST00000558752 ANKRD60Q9BZ19 345 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 FAM192AQ9GZU8 254 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 ST3GAL6Q9Y274 331 aa12.31□□□□□ -0.44
RPL28-206ENST00000558752 ZNF729A6NN14 1252 aaPredicted RBP12.3□□□□□ -0.44
RPL28-206ENST00000558752 GTF2F2P13984 249 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 GLIPR1P48060 266 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 DYNLT3P51808 116 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 SLC35A2P78381 396 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 SPHARQ15513 63 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 PAN3Q58A45 887 aaKnown RBP12.3□□□□□ -0.44
RPL28-206ENST00000558752 UNQ9370/PRO34162Q6UXP9 181 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 TCF23Q7RTU1 214 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 TPRX1Q8N7U7 411 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 ZFP41Q8N8Y5 198 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 ZNF596Q8TC21 504 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 DERL3Q96Q80 235 aa12.3□□□□□ -0.44
RPL28-206ENST00000558752 ZNF184Q99676 751 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms