RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TOMM5Q8N4H5 51 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 ASCC1Q8N9N2 400 aaKnown RBP12.41□□□□□ -0.42
VPS18-202ENST00000558474 DEFB108BQ8NET1 73 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 NUDCD2Q8WVJ2 157 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 C7orf50Q9BRJ6 194 aaKnown RBP12.41□□□□□ -0.42
VPS18-202ENST00000558474 LIME1Q9H400 295 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
VPS18-202ENST00000558474 SPTAN1Q13813 2472 aaKnown RBP12.4□□□□□ -0.42
VPS18-202ENST00000558474 DCHS2Q6V1P9 2916 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 UTP20O75691 2785 aaKnown RBP12.4□□□□□ -0.42
VPS18-202ENST00000558474 ANKRD20A5PA0PJZ0 165 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 TMEM30CPA0ZSE6 113 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 NDUFS7O75251 213 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 LY6HO94772 140 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 ZNF205O95201 554 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 FCGR3AP08637 254 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 NPY4RP50391 375 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 TAS2R19P59542 299 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 DEFA1P59665 94 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 DEFA3P59666 94 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 GRK1Q15835 563 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 ACTBL2Q562R1 376 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 LRRC10Q5BKY1 277 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 RSBN1Q5VWQ0 802 aaPredicted RBP12.4□□□□□ -0.42
VPS18-202ENST00000558474 ZNF880Q6PDB4 577 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 TRAT1Q6PIZ9 186 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 BRICD5Q6PL45 260 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 BPIFB2Q8N4F0 458 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 OR4S1Q8NGB4 309 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 GCDHQ92947 438 aaPredicted RBP12.4□□□□□ -0.42
VPS18-202ENST00000558474 CCL13Q99616 98 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 PPA2Q9H2U2 334 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 ABCB10Q9NRK6 738 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 KLK11Q9UBX7 282 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 METRNQ9UJH8 293 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
VPS18-202ENST00000558474 DOPEY2Q9Y3R5 2298 aa12.4□□□□□ -0.42
VPS18-202ENST00000558474 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 ADAM20O43506 726 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 NDUFB3O43676 98 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 SSX4O60224 188 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 MT-ND4P03905 459 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 FAUP35544 74 aaKnown RBP12.39□□□□□ -0.43
VPS18-202ENST00000558474 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 GDPD3Q7L5L3 318 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 NLRC3Q7RTR2 1065 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 RTN4RL2Q86UN3 420 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 LYSMD2Q8IV50 215 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 ZNRF1Q8ND25 227 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 PLPPR1Q8TBJ4 325 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 MRPL30Q8TCC3 161 aaKnown RBP12.39□□□□□ -0.43
VPS18-202ENST00000558474 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 CHMP1AQ9HD42 196 aaPredicted RBP12.39□□□□□ -0.43
VPS18-202ENST00000558474 MBNL3Q9NUK0 354 aaKnown RBP12.39□□□□□ -0.43
VPS18-202ENST00000558474 LPAR3Q9UBY5 353 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 OPN4Q9UHM6 478 aa12.39□□□□□ -0.43
VPS18-202ENST00000558474 KIR2DS1A0A191URI9 304 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 NAP1L6A6NFF2 107 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 CENPXA8MT69 81 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 CEACAM18A8MTB9 384 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 HSPB6O14558 160 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 LANCL1O43813 399 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 DIRAS3O95661 229 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 P2RX3P56373 397 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 TAS2R46P59540 309 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 KRTAP10-9P60411 292 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 MEF2CQ06413 473 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 ASAH1Q13510 395 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 KLF9Q13886 244 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 ATXN7L3Q14CW9 347 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 CR1LQ2VPA4 569 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 KRBOX4Q5JUW0 171 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 ZNF57Q68EA5 555 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 ZNF525Q8N782 197 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 FAM216BQ8N7L0 139 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 TMEM185AQ8NFB2 350 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 BEST4Q8NFU0 473 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 FAM168AQ92567 244 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 NEIL1Q96FI4 390 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 COX4I2Q96KJ9 171 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 Q9N2K0 584 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 RAB9BQ9NP90 201 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
VPS18-202ENST00000558474 SLC25A10Q9UBX3 287 aaPredicted RBP12.38□□□□□ -0.43
VPS18-202ENST00000558474 F5H0A9 414 aaPredicted RBP12.37□□□□□ -0.43
VPS18-202ENST00000558474 CD74P04233 296 aa12.37□□□□□ -0.43
VPS18-202ENST00000558474 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
VPS18-202ENST00000558474 GZMHP20718 246 aa12.37□□□□□ -0.43
VPS18-202ENST00000558474 RBMXP38159 391 aaKnown RBP12.37□□□□□ -0.43
VPS18-202ENST00000558474 IFITM3Q01628 133 aa12.37□□□□□ -0.43
VPS18-202ENST00000558474 AESQ08117 197 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms