RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 METTL15P1P0C7V9 234 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 DTYMKP23919 212 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 MSMO1Q15800 293 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 ADIRFQ15847 76 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 CLDN23Q96B33 292 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 FZR1Q9UM11 496 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 POC1AQ8NBT0 407 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 AQP10Q96PS8 301 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 PSENENQ9NZ42 101 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 KLF13Q9Y2Y9 288 aaPredicted RBP13.41□□□□□ -0.26
AP4E1-202ENST00000558439 SHANK1Q9Y566 2161 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 SLC22A20A6NK97 555 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 H7C1Q1 480 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 EDDM3BP56851 147 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 RBM11P57052 281 aaKnown RBP13.41□□□□□ -0.26
AP4E1-202ENST00000558439 ZNF816Q0VGE8 651 aaPredicted RBP13.41□□□□□ -0.26
AP4E1-202ENST00000558439 ZNF154Q13106 437 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 IL13RA2Q14627 380 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 HIST2H3AQ71DI3 136 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 DMBX1Q8NFW5 382 aa13.41□□□□□ -0.26
AP4E1-202ENST00000558439 NUP210Q8TEM1 1887 aaPredicted RBP13.4□□□□□ -0.26
AP4E1-202ENST00000558439 DEDDO75618 318 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 LYZL6O75951 148 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 DYNLT3P51808 116 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 SUCLG1P53597 346 aaKnown RBP13.4□□□□□ -0.26
AP4E1-202ENST00000558439 RUNX1Q01196 453 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 EWSR1Q01844 656 aaKnown RBP eCLIP13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CST9LP1Q5W188 147 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 TRIB1Q96RU8 372 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CACNG5Q9UF02 275 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CXorf66Q5JRM2 361 aaPredicted RBP13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CDCP2Q5VXM1 449 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 FAM185AQ8N0U4 392 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 SLC35B3Q9H1N7 401 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 UMODP07911 640 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 PTAFRP25105 342 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 RAB5CP51148 216 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 SELENOVP59797 346 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CATR1Q13166 79 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 DMRTA2Q96SC8 542 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 LIPGQ9Y5X9 500 aa13.4□□□□□ -0.26
AP4E1-202ENST00000558439 CRYM-AS1A6NIL9 109 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 NGFP01138 241 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 CTRB1P17538 263 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 MEOX1P50221 254 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 SULT1A2P50226 295 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 FAM3AP98173 230 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 LTBP2Q14767 1821 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 IZUMO4Q1ZYL8 232 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 CTRB2Q6GPI1 263 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 MRPL14Q6P1L8 145 aaKnown RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 WNT5BQ9H1J7 359 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 A0A1W2PPE2 198 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 SH2D1BO14796 132 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 PMP22Q01453 160 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 SLC16A13Q7RTY0 426 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM178AQ8NBL3 297 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 SH3BGRL3Q9H299 93 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 C10orf128Q5T292 105 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF561Q8N587 486 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 LHX4Q969G2 390 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 WSB1Q9Y6I7 421 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 TERTO14746 1132 aaKnown RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 IFNA10P01566 189 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 IGHV3-13P01766 116 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 IGHV3-7P01780 117 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 FABP9Q0Z7S8 132 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 CALHM1Q8IU99 346 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
AP4E1-202ENST00000558439 CYYR1Q96J86 154 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 POLDIP2Q9Y2S7 368 aa13.39□□□□□ -0.27
AP4E1-202ENST00000558439 A0A1W2PPV4 95 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 E9PLN8 166 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 DNASE2O00115 360 aaPredicted RBP13.38□□□□□ -0.27
AP4E1-202ENST00000558439 IFNA4P05014 189 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 CEACAM6P40199 344 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ALKBH6Q3KRA9 238 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF787Q6DD87 383 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 FRZBQ92765 325 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 TECTBQ96PL2 329 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF581Q9P0T4 197 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 APC2O95996 2303 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 CDIPTO14735 213 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 SYNGR1O43759 233 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 SRSF10O75494 262 aaKnown RBP13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ZNF17P17021 662 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ATP6V0CP27449 155 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 PTGDSP41222 190 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 TGIF1Q15583 401 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 TMEM211Q6ICI0 200 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 ETV3LQ6ZN32 361 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 IMMP1LQ96LU5 166 aa13.38□□□□□ -0.27
AP4E1-202ENST00000558439 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms