RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 MYDGFQ969H8 173 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 TOMM40LQ969M1 308 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 RBM14Q96PK6 669 aaKnown RBP12.41□□□□□ -0.42
TPM1-211ENST00000558314 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
TPM1-211ENST00000558314 OR6C3Q9NZP0 311 aa12.41□□□□□ -0.42
TPM1-211ENST00000558314 TMEM212A6NML5 194 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 OR2F2O95006 317 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 HTR3BO95264 441 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 MPIG6BO95866 241 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 IGLV1-47P01700 117 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 RPSAP08865 295 aaKnown RBP12.4□□□□□ -0.42
TPM1-211ENST00000558314 RAB3AP20336 220 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 LMO1P25800 156 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 GTF2A1P52655 376 aaPredicted RBP12.4□□□□□ -0.42
TPM1-211ENST00000558314 ZP1P60852 638 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 CD83Q01151 205 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 HNF4GQ14541 408 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 CDK5R1Q15078 307 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 RSU1Q15404 277 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 OR13A1Q8NGR1 328 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 MRGPRDQ8TDS7 321 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 CREB3L1Q96BA8 519 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 Q96MT0 163 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 ERVK13-1Q9NX77 482 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 TAS2R4Q9NYW5 299 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 CALYQ9NYX4 217 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
TPM1-211ENST00000558314 TSSC4Q9Y5U2 329 aaPredicted RBP12.4□□□□□ -0.42
TPM1-211ENST00000558314 KBTBD11-OT1A0A1B0GTJ5 212 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 GABRPO00591 440 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
TPM1-211ENST00000558314 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 FAM106CPP0CH98 169 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 MTNR1BP49286 362 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 PIGYQ3MUY2 71 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 TCTEX1D4Q5JR98 221 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 ZFP1Q6P2D0 407 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 ZNF565Q8N9K5 539 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 OR51A2Q8NGJ7 313 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 OR56B4Q8NH76 319 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 OR9G1Q8NH87 305 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 KIRREL1Q96J84 757 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 ZNF649Q9BS31 505 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 RHOFQ9HBH0 211 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 IDI2-AS1Q9NZ38 188 aa12.39□□□□□ -0.43
TPM1-211ENST00000558314 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.39□□□□□ -0.43
TPM1-211ENST00000558314 A0A1W2PPE3 182 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 ALX3O95076 343 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 CSN2P05814 226 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 GABRB1P18505 474 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 CD34P28906 385 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
TPM1-211ENST00000558314 DRAM1Q8N682 238 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 CPNE2Q96FN4 548 aaPredicted RBP12.38□□□□□ -0.43
TPM1-211ENST00000558314 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 C9orf16Q9BUW7 83 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 MOB4Q9Y3A3 225 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 RPL36Q9Y3U8 105 aaKnown RBP12.38□□□□□ -0.43
TPM1-211ENST00000558314 AMMECR1Q9Y4X0 333 aaPredicted RBP12.38□□□□□ -0.43
TPM1-211ENST00000558314 HSPE1-MOB4S4R3N1 261 aa12.38□□□□□ -0.43
TPM1-211ENST00000558314 TRAV24A0A0B4J272 114 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 LOC100130705A0A1B0GUX0 176 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 J3QR06 171 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 MPZL2O60487 215 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 CDRT1O95170 752 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 CLIC3O95833 236 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 TMEM11P17152 192 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 SSTR5P35346 364 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 SLC35A2P78381 396 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 RAB40BQ12829 278 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 DIAPH2-AS1Q14236 149 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 DEFB121Q5J5C9 76 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 ZNF329Q86UD4 541 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 PARP16Q8N5Y8 322 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 OR51T1Q8NGJ9 327 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 RHOXF1Q8NHV9 184 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 S100A13Q99584 98 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 JAM3Q9BX67 310 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 INPP5EQ9NRR6 644 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 ZNF581Q9P0T4 197 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 LINC00527Q9UJ94 153 aa12.37□□□□□ -0.43
TPM1-211ENST00000558314 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
TPM1-211ENST00000558314 BAG2O95816 211 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 IL1AP01583 271 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 AMY1AP04745 511 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 AMY2AP04746 511 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 CD2P06729 351 aa12.36□□□□□ -0.43
TPM1-211ENST00000558314 PPP3R1P63098 170 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms