RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 IGSF11Q5DX21 431 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 SLC36A1Q7Z2H8 476 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF843Q8N446 348 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 CD177Q8N6Q3 437 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 Q9N2K0 584 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 DYNLRB1Q9NP97 96 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 DNAJB11Q9UBS4 358 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 LHBP01229 141 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 OR5H8P0DN80 308 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 PSG2P11465 335 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 AGAP20933 346 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 CD80P33681 288 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 CFHR2P36980 270 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 RRAS2P62070 204 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF672Q499Z4 452 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 AADACL3Q5VUY0 350 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 GLDNQ6ZMI3 551 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 MYO18BQ8IUG5 2567 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 OR10Z1Q8NGY1 313 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 GLS2Q9UI32 602 aa17.14■□□□□ 0.33
SNRPA1-205ENST00000558036 ABCA4P78363 2273 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 IGKV1D-17A0A075B6S4 117 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 SCTP09683 121 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 MECP2P51608 486 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 CD83Q01151 205 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 COL10A1Q03692 680 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 ZMYND11Q15326 602 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF2Q9BSG1 426 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 NECAP2Q9NVZ3 263 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF221Q9UK13 617 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 WIPI2Q9Y4P8 454 aa17.13■□□□□ 0.33
SNRPA1-205ENST00000558036 OR5H14A6NHG9 310 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 C1QL1O75973 258 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 PI3P19957 117 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 MUC15Q8N387 334 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 OR6F1Q8NGZ6 308 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 TMEM204Q9BSN7 226 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 SAP30LQ9HAJ7 183 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 DECR2Q9NUI1 292 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 RNF7Q9UBF6 113 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF69Q9UC07 566 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 SSNA1O43805 119 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 GLAP06280 429 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 PRDX2P32119 198 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 GABRA2P47869 451 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 UBE2MP61081 183 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 FCN2Q15485 313 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 C4orf46Q504U0 113 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 METTL11BQ5VVY1 283 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF497Q6ZNH5 498 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 LHFPL1Q86WI0 220 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 TMEM17Q86X19 198 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 ASCC1Q8N9N2 400 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 ADAD2Q8NCV1 583 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 DHRS9Q9BPW9 319 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 MED28Q9H204 178 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 RASL12Q9NYN1 266 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 NPTNQ9Y639 398 aa17.12■□□□□ 0.33
SNRPA1-205ENST00000558036 PRAF2O60831 178 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 CD55P08174 381 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 ADH4P08319 380 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 LMO1P25800 156 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 EFNB3Q15768 340 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 DEFB108BQ8NET1 73 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 DIRC2Q96SL1 478 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 RANGRFQ9HD47 186 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 MEX3AA1L020 520 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 B9A039 149 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 TNFRSF1AP19438 455 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 AESQ08117 197 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 GRK1Q15835 563 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 ZNF660Q6AZW8 331 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 UBALD1Q8TB05 177 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 ST6GAL2Q96JF0 529 aa17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 FYTTD1Q96QD9 318 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-205ENST00000558036 USP9XQ93008 2570 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 UTP20O75691 2785 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 BET1O15155 118 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 RNF224P0DH78 156 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 NFYAP23511 347 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 OR3A1P47881 315 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 SEC61A1P61619 476 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 HERPUD1Q15011 391 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 TESK1Q15569 626 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 TPRX1Q8N7U7 411 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 OR11H7Q8NGC8 314 aa17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 RIMS4Q9H426 269 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-205ENST00000558036 FABP7O15540 132 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 OR4E1P0C645 316 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 CXCL3P19876 107 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 FCGR2CP31995 323 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 MDH2P40926 338 aaKnown RBP17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 SWI5Q1ZZU3 235 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 FAM209AQ5JX71 171 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 MUC20Q8N307 709 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 PRR18Q8N4B5 295 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 Q8TCH9 128 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 DMRTB1Q96MA1 342 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 SHARPINQ9H0F6 387 aa17.09■□□□□ 0.33
SNRPA1-205ENST00000558036 MS4A5Q9H3V2 200 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms