RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 OR51T1Q8NGJ9 327 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 RPEQ96AT9 228 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 RNFT2Q96EX2 444 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 PELI1Q96FA3 418 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 CENPNQ96H22 339 aaPredicted RBP12.62□□□□□ -0.39
SCFD1-224ENST00000557713 B9D2Q9BPU9 175 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 NCOR1P1Q9H4R4 102 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 LINC00574Q9H8X3 128 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 NEK6Q9HC98 313 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 PCDHB16Q9NRJ7 776 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 OAZ3Q9UMX2 235 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
SCFD1-224ENST00000557713 A0A1W2PPI3 338 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 E9PQ18 207 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 J3QLW9 94 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 ZNF19P17023 458 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 BNIP1Q12981 228 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 DIAPH2-AS1Q14236 149 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 KISS1Q15726 138 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 ELP2Q6IA86 826 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 DRAM1Q8N682 238 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 OR51D1Q8NGF3 324 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 OR13A1Q8NGR1 328 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 OR56B4Q8NH76 319 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 CHPT1Q8WUD6 406 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 TOMM40LQ969M1 308 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 NOL4LQ96MY1 436 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-224ENST00000557713 ZNF649Q9BS31 505 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 ZFP57Q9NU63 452 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 KIF25Q9UIL4 384 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 PSG11Q9UQ72 335 aa12.61□□□□□ -0.39
SCFD1-224ENST00000557713 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
SCFD1-224ENST00000557713 AMMECR1Q9Y4X0 333 aaPredicted RBP12.61□□□□□ -0.39
SCFD1-224ENST00000557713 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 NPIPB11E5RHQ5 1161 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 H0YJX3 145 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 IGHV3-7P01780 117 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 DBTP11182 482 aaKnown RBP12.6□□□□□ -0.39
SCFD1-224ENST00000557713 MTNR1BP49286 362 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 SNRPGP62308 76 aaKnown RBP12.6□□□□□ -0.39
SCFD1-224ENST00000557713 CD69Q07108 199 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
SCFD1-224ENST00000557713 OR2W3Q7Z3T1 314 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 ACBD7Q8N6N7 88 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 OR5D14Q8NGL3 314 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 DPF1Q92782 380 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
SCFD1-224ENST00000557713 IDI2-AS1Q9NZ38 188 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
SCFD1-224ENST00000557713 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 FGF16O43320 207 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 SULT1B1O43704 296 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 IGHG2P01859 326 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 TMEM11P17152 192 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 C21orf33P30042 268 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-224ENST00000557713 SLC6A1P30531 599 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 MYCNOSP40205 109 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 GLP1RP43220 463 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 RAB7AP51149 207 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 PAX5Q02548 391 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 ZNF691Q5VV52 312 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 MEDAGQ5VYS4 303 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 C8orf86Q6ZUL3 223 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 SERPINA12Q8IW75 414 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 PARP16Q8N5Y8 322 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 CNIH3Q8TBE1 160 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 C4orf36Q96KX1 117 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 NR1H4Q96RI1 486 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-224ENST00000557713 P2RX4Q99571 388 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 BARHL1Q9BZE3 327 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 IMPAD1Q9NX62 359 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
SCFD1-224ENST00000557713 SAC3D1A6NKF1 404 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 HSPB6O14558 160 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 IL1AP01583 271 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 HCKP08631 526 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 HES1Q14469 280 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 HNF4GQ14541 408 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 PAN3Q58A45 887 aaKnown RBP12.58□□□□□ -0.4
SCFD1-224ENST00000557713 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 RSBN1Q5VWQ0 802 aaPredicted RBP12.58□□□□□ -0.4
SCFD1-224ENST00000557713 SLC16A12Q6ZSM3 486 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 OR8H3Q8N146 312 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 Q8NFD4 153 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 OR10A7Q8NGE5 316 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 RFESDQ8TAC1 157 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 PLPPR1Q8TBJ4 325 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 HAVCR2Q8TDQ0 301 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 LGALS12Q96DT0 336 aa12.58□□□□□ -0.4
SCFD1-224ENST00000557713 WWC2-AS2Q96NR7 200 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms