RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 H3BNX3 289 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 M0QZK8 103 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 MPZL2O60487 215 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 IGLL1P15814 213 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 NFYBP25208 207 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 C21orf33P30042 268 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 OR3A4PP47883 348 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 RBM39Q14498 530 aaKnown RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 ZFP1Q6P2D0 407 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 CBR4Q8N4T8 237 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 PXT1Q8NFP0 134 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 OR51T1Q8NGJ9 327 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 MYDGFQ969H8 173 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 NR1H4Q96RI1 486 aaPredicted RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF649Q9BS31 505 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
TUBB3-213ENST00000557262 AMBNQ9NP70 447 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 INPP5EQ9NRR6 644 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 ERVK13-1Q9NX77 482 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
TUBB3-213ENST00000557262 E9PI62 339 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 MAGEB3O15480 346 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 PF4P02776 101 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 FAM106CPP0CH98 169 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 RAB40BQ12829 278 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 PAN3Q58A45 887 aaKnown RBP12.65□□□□□ -0.38
TUBB3-213ENST00000557262 C9orf152Q5JTZ5 239 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 UTF1Q5T230 341 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 CNIH3Q8TBE1 160 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
TUBB3-213ENST00000557262 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 PDCD1LG2Q9BQ51 273 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 ZNF281Q9Y2X9 895 aa12.65□□□□□ -0.38
TUBB3-213ENST00000557262 MEIKINA0A087WXM9 373 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 TRAV24A0A0B4J272 114 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A18PA6NE21 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A16PA6NEW6 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A20PA6NIJ5 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 SH2D7A6NKC9 451 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A9PA6NNJ1 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A12PA8MX19 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A5PA8MXJ8 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 J3QR06 171 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A15PP0C7V4 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A13PP0C7W8 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A14PP0C7W9 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 FAM90A24PP0C7X0 464 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 RAB3AP20336 220 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 Q8NFD4 153 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 OR13A1Q8NGR1 328 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 HAVCR2Q8TDQ0 301 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 TSEN15Q8WW01 171 aaKnown RBP12.64□□□□□ -0.39
TUBB3-213ENST00000557262 RPEQ96AT9 228 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 GPER1Q99527 375 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 LINC00574Q9H8X3 128 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 MRPS18AQ9NVS2 196 aaKnown RBP12.64□□□□□ -0.39
TUBB3-213ENST00000557262 CALYQ9NYX4 217 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
TUBB3-213ENST00000557262 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
TUBB3-213ENST00000557262 HSPB6O14558 160 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 GLP1RP43220 463 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 KCNJ3P48549 501 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 IL13RA2Q14627 380 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 ZSCAN26Q16670 478 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 KLHL22Q53GT1 634 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 ZNF529Q6P280 563 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 C10orf99Q6UWK7 81 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 ASCL4Q6XD76 172 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 SLC16A12Q6ZSM3 486 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 OR52I1Q8NGK6 324 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 TOMM40LQ969M1 308 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 C9orf16Q9BUW7 83 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 PSG11Q9UQ72 335 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 MOB4Q9Y3A3 225 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 RPL36Q9Y3U8 105 aaKnown RBP12.63□□□□□ -0.39
TUBB3-213ENST00000557262 HSPE1-MOB4S4R3N1 261 aa12.63□□□□□ -0.39
TUBB3-213ENST00000557262 LOC100130705A0A1B0GUX0 176 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 NPIPB11E5RHQ5 1161 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 GABRPO00591 440 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
TUBB3-213ENST00000557262 IL1AP01583 271 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 SNRNP70P08621 437 aaKnown RBP12.62□□□□□ -0.39
TUBB3-213ENST00000557262 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
TUBB3-213ENST00000557262 SLC35A2P78381 396 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 PAX5Q02548 391 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 RSU1Q15404 277 aa12.62□□□□□ -0.39
TUBB3-213ENST00000557262 RSBN1Q5VWQ0 802 aaPredicted RBP12.62□□□□□ -0.39
TUBB3-213ENST00000557262 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms