RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	GNB1	P62873	340 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	SELENOW	P63302	87 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	EIF2B1	Q14232	305 aa	Known RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	HNF4G	Q14541	408 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	HLA-DRB5	Q30154	266 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	KIAA2026	Q5HYC2	2103 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	HAGHL	Q6PII5	290 aa	Predicted RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	TCF23	Q7RTU1	214 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	ZNF573	Q86YE8	665 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	OFCC1	Q8IZS5	231 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR8H2	Q8N162	312 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR10A6	Q8NH74	314 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	CORO2A	Q92828	525 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	TMEM106A	Q96A25	262 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	SLAMF6	Q96DU3	332 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	KCTD7	Q96MP8	289 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	ERMAP	Q96PL5	475 aa	Predicted RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR52B2	Q96RD2	323 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	CGREF1	Q99674	301 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	TMED9	Q9BVK6	235 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	ELOVL1	Q9BW60	279 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	RETN	Q9HD89	108 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	RPRD1B	Q9NQG5	326 aa	Known RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	LIN7C	Q9NUP9	197 aa	Known RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	CCDC167	Q9P0B6	97 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	ACTR3B	Q9P1U1	418 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	RHCG	Q9UBD6	479 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	DMBT1	Q9UGM3	2413 aa	Predicted RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	STUB1	Q9UNE7	303 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	UBE2J1	Q9Y385	318 aa	Predicted RBP	3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	CEPT1	Q9Y6K0	416 aa		3.57	□□□□□ -1.84
SCFD1-223	ENST00000557076	DYNC1H1	Q14204	4646 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	HSPG2	P98160	4391 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076		A0A1W2PRQ8	180 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MEX3A	A1L020	520 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	NCBP2L	A6PVI3	153 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ZNF878	C9JN71	531 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	LINC01619	G3V211	115 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MPZL2	O60487	215 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	TMEM11	P17152	192 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	VDAC1	P21796	283 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	FAS	P25445	335 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	KDELR2	P33947	212 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	GPR4	P46093	362 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	YAP1	P46937	504 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ZNF121	P58317	390 aa	Predicted RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MTPN	P58546	118 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ZP1	P60852	638 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	STX1B	P61266	288 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	DGCR6	Q14129	220 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	HES1	Q14469	280 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MZT2A	Q6P582	158 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	EPGN	Q6UW88	154 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	FAM57B	Q71RH2	274 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR8H3	Q8N146	312 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MREG	Q8N565	214 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ASCC1	Q8N9N2	400 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076		Q8N9W7	124 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR4K13	Q8NH42	304 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR56B4	Q8NH76	319 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ABHD5	Q8WTS1	349 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ARPC1A	Q92747	370 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	RPE	Q96AT9	228 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ZNF488	Q96MN9	340 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	FAM110A	Q9BQ89	295 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	TOLLIP	Q9H0E2	274 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	ANKRD19P	Q9H560	264 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	GNB4	Q9HAV0	340 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	PLSCR3	Q9NRY6	295 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	TAS2R3	Q9NYW6	316 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	OR14J1	Q9UGF5	321 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	MRM2	Q9UI43	246 aa	Known RBP	3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	POLDIP2	Q9Y2S7	368 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	WSB1	Q9Y6I7	421 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	DNAH2	Q9P225	4427 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	DNAH17	Q9UFH2	4485 aa		3.56	□□□□□ -1.84
SCFD1-223	ENST00000557076	DNAH11	Q96DT5	4516 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	FAT2	Q9NYQ8	4349 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076		A0A1W2PPI3	338 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	DHRS12	A0PJE2	317 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	TVP23A	A6NH52	213 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076		J3QT63	122 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	RGS11	O94810	467 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	IGKV1D-33	P01593	117 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	IGKV1-33	P01594	117 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	HSPB1	P04792	205 aa	Known RBP	3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	PSKH1	P11801	424 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	ATP6V1B1	P15313	513 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	CDK2	P24941	298 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	MPZ	P25189	248 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	HSD11B1	P28845	292 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	FMO3	P31513	532 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	SOX6	P35712	828 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	OPRL1	P41146	370 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	HAAO	P46952	286 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	OMP	P47874	163 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	RAB7A	P51149	207 aa		3.55	□□□□□ -1.84
SCFD1-223	ENST00000557076	SLC18A1	P54219	525 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms