RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 CHRNA7P36544 502 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 TGIF1Q15583 401 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 PLAC9Q5JTB6 97 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10A7Q8NGE5 316 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SPINK2P20155 84 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 BCL3P20749 454 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 PPP1CCP36873 323 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 HFEQ30201 348 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 AUP1Q9Y679 476 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 KLK2P20151 261 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SRSF3P84103 164 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 VASH2Q86V25 355 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 DAZAP1Q96EP5 407 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR5H1A6NKK0 313 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 GATCO43716 136 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 IGKV3-11P04433 115 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 DANCRP0C864 163 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 FOXO1Q12778 655 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 KHDC3LQ587J8 217 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 SPEM1Q8N4L4 309 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 TMEM252Q8N6L7 170 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 TAAR6Q96RI8 345 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 PRSS50Q9UI38 385 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 VAX2Q9UIW0 290 aa13.12□□□□□ -0.31
ARHGEF40-207ENST00000556399 PRF1P14222 555 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 SELEP16581 610 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 CA6P23280 308 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10G4Q8NGN3 311 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10G9Q8NGN4 311 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10G7Q8NGN6 311 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 P4HTMQ9NXG6 502 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 DHRS7CA6NNS2 312 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 RAB4AP20338 218 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 MEGF10Q96KG7 1140 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 RARRES2Q99969 163 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 SOX7Q9BT81 388 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF586Q9NXT0 402 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 IP6K3Q96PC2 410 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 DEFB127Q9H1M4 99 aa13.11□□□□□ -0.31
ARHGEF40-207ENST00000556399 TRBV23-1A0A0A0MS06 115 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 SRD5A2P31213 254 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 FLVCR1-AS1Q8TAF5 88 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 SF3B5Q9BWJ5 86 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 Q9N2K0 584 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TDRD6O60522 2096 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 IGKV1D-43A0A0B4J1Z2 117 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 AQP7O14520 342 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TRGC2P03986 189 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 CCL3P10147 92 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TNFSF4P23510 183 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TIMP4Q99727 224 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR2H1Q9GZK4 316 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TAAR3PQ9P1P4 343 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 H0YL77 283 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 RPL36A-HNRNPH2H7BZ11 118 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 BMP5P22003 454 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TPPP2P59282 170 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TIGITQ495A1 244 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF501Q96CX3 271 aaPredicted RBP13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZNF17P17021 662 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 NTF3P20783 257 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 SSTP61278 116 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 PHYHD1Q5SRE7 291 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR2T10Q8NGZ9 312 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 NGFP01138 241 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 PKIAP61925 76 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 ZXDAP98168 799 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 APCDD1LQ8NCL9 501 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 SMIM8Q96KF7 97 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 TMEM38BQ9NVV0 291 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 BRWD1Q9NSI6 2320 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 COL19A1Q14993 1142 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 ETV3LQ6ZN32 361 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 NEIL1Q96FI4 390 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 CTDSP1Q9GZU7 261 aa13.09□□□□□ -0.31
ARHGEF40-207ENST00000556399 METTL1Q9UBP6 276 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms